Protein–RNA interactions for Protein: Q71RC2

LARP4, La-related protein 4, humanhuman

Known RBP eCLIP

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4Q71RC2 PLCXD1-211ENST00000484611 540 ntTSL 414.04□□□□□ -0.161e-6■■□□□ 13.8
LARP4Q71RC2 PLCXD1-206ENST00000430923 587 ntAPPRIS ALT2 TSL 213.84□□□□□ -0.191e-6■■□□□ 13.8
LARP4Q71RC2 FBRSL1-205ENST00000542061 3175 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.271e-6■■□□□ 13.8
LARP4Q71RC2 NAP1L1-201ENST00000261182 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.334e-38■■□□□ 13.8
LARP4Q71RC2 PLCXD1-203ENST00000399012 5287 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.581e-6■■□□□ 13.8
LARP4Q71RC2 NAP1L1-206ENST00000544816 1597 ntTSL 2 BASIC11.12□□□□□ -0.634e-38■■□□□ 13.8
LARP4Q71RC2 NAP1L1-210ENST00000547773 1967 ntTSL 5 BASIC11.09□□□□□ -0.634e-38■■□□□ 13.8
LARP4Q71RC2 NAP1L1-205ENST00000542344 1675 ntTSL 2 BASIC10.76□□□□□ -0.694e-38■■□□□ 13.8
LARP4Q71RC2 NAP1L1-203ENST00000431879 2031 ntTSL 2 BASIC10.43□□□□□ -0.744e-38■■□□□ 13.8
LARP4Q71RC2 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.44e-38■■□□□ 13.8
LARP4Q71RC2 NAP1L1-223ENST00000552013 679 ntTSL 26.32□□□□□ -1.41e-6■■□□□ 13.8
LARP4Q71RC2 NAP1L1-225ENST00000552147 1009 ntTSL 56.11□□□□□ -1.434e-38■■□□□ 13.8
LARP4Q71RC2 NAP1L1-224ENST00000552056 1981 ntTSL 54.73□□□□□ -1.654e-38■■□□□ 13.8
LARP4Q71RC2 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.12■□□□□ 0.173e-7■■□□□ 13.8
LARP4Q71RC2 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.173e-7■■□□□ 13.8
LARP4Q71RC2 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.113e-7■■□□□ 13.8
LARP4Q71RC2 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.213e-7■■□□□ 13.8
LARP4Q71RC2 AGTRAP-209ENST00000476512 942 ntTSL 316.24■□□□□ 0.193e-6■■□□□ 13.8
LARP4Q71RC2 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC15.64■□□□□ 0.093e-6■■□□□ 13.8
LARP4Q71RC2 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC13.31□□□□□ -0.283e-6■■□□□ 13.8
LARP4Q71RC2 AGTRAP-208ENST00000476309 748 ntTSL 313.31□□□□□ -0.283e-6■■□□□ 13.8
LARP4Q71RC2 RPLP1-204ENST00000488122 940 ntTSL 219.13■□□□□ 0.653e-30■■□□□ 13.8
LARP4Q71RC2 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.153e-13■■□□□ 13.8
LARP4Q71RC2 PSMD13-211ENST00000532025 653 ntTSL 315.6■□□□□ 0.093e-13■■□□□ 13.8
LARP4Q71RC2 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.063e-13■■□□□ 13.8
LARP4Q71RC2 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC14.58□□□□□ -0.083e-13■■□□□ 13.8
LARP4Q71RC2 PSMD13-202ENST00000382671 1489 ntTSL 1 (best)14.5□□□□□ -0.093e-13■■□□□ 13.8
LARP4Q71RC2 PSMD13-204ENST00000525665 1632 ntTSL 514.46□□□□□ -0.093e-13■■□□□ 13.8
LARP4Q71RC2 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC14.43□□□□□ -0.13e-13■■□□□ 13.8
LARP4Q71RC2 PSMD13-207ENST00000527982 2200 nt11.28□□□□□ -0.63e-13■■□□□ 13.8
LARP4Q71RC2 PSMD13-201ENST00000352303 1427 ntTSL 5 BASIC11.26□□□□□ -0.613e-13■■□□□ 13.8
LARP4Q71RC2 MRPS21-202ENST00000614145 1226 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.83e-13■■□□□ 13.8
LARP4Q71RC2 PSMD13-205ENST00000526783 892 ntTSL 59.32□□□□□ -0.923e-13■■□□□ 13.8
LARP4Q71RC2 SEPT2-244ENST00000495463 501 ntTSL 426.47■■□□□ 1.831e-6■■□□□ 13.8
LARP4Q71RC2 SEPT2-234ENST00000475474 749 ntTSL 223.83■■□□□ 1.411e-6■■□□□ 13.8
LARP4Q71RC2 SEPT2-238ENST00000482304 740 ntTSL 223.03■■□□□ 1.281e-6■■□□□ 13.8
LARP4Q71RC2 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.211e-6■■□□□ 13.8
LARP4Q71RC2 SEPT2-227ENST00000462147 576 ntTSL 422.5■■□□□ 1.191e-6■■□□□ 13.8
LARP4Q71RC2 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC22.11■■□□□ 1.131e-6■■□□□ 13.8
LARP4Q71RC2 SEPT2-229ENST00000466211 584 ntTSL 320.96■□□□□ 0.951e-6■■□□□ 13.8
LARP4Q71RC2 SEPT2-216ENST00000434955 480 ntTSL 320.89■□□□□ 0.931e-6■■□□□ 13.8
LARP4Q71RC2 EHBP1-204ENST00000405482 1311 ntTSL 220.61■□□□□ 0.891e-6■■□□□ 13.8
LARP4Q71RC2 SEPT2-209ENST00000411484 561 ntTSL 420.1■□□□□ 0.811e-6■■□□□ 13.8
LARP4Q71RC2 SEPT2-217ENST00000436795 775 ntTSL 520.05■□□□□ 0.81e-6■■□□□ 13.8
LARP4Q71RC2 SEPT2-243ENST00000494824 565 ntTSL 519.56■□□□□ 0.721e-6■■□□□ 13.8
LARP4Q71RC2 PTBP1-212ENST00000587136 583 ntTSL 319.33■□□□□ 0.681e-6■■□□□ 13.8
LARP4Q71RC2 SEPT2-231ENST00000469175 486 ntTSL 319.33■□□□□ 0.681e-6■■□□□ 13.8
LARP4Q71RC2 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC19.13■□□□□ 0.651e-6■■□□□ 13.8
LARP4Q71RC2 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.651e-6■■□□□ 13.8
LARP4Q71RC2 PTBP1-207ENST00000585932 1030 ntTSL 319■□□□□ 0.631e-6■■□□□ 13.8
LARP4Q71RC2 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.561e-6■■□□□ 13.8
LARP4Q71RC2 TCF25-207ENST00000562256 1879 ntTSL 1 (best)18.46■□□□□ 0.541e-6■■□□□ 13.8
LARP4Q71RC2 SEPT2-210ENST00000420786 539 ntTSL 518.42■□□□□ 0.541e-6■■□□□ 13.8
LARP4Q71RC2 PTBP1-215ENST00000589883 683 ntTSL 318.04■□□□□ 0.481e-6■■□□□ 13.8
LARP4Q71RC2 PTBP1-219ENST00000621737 1125 ntTSL 517.95■□□□□ 0.461e-6■■□□□ 13.8
LARP4Q71RC2 TCF25-218ENST00000566283 515 ntTSL 217.9■□□□□ 0.461e-6■■□□□ 13.8
LARP4Q71RC2 TCF25-213ENST00000564957 459 ntTSL 317.9■□□□□ 0.461e-6■■□□□ 13.8
LARP4Q71RC2 TCF25-216ENST00000565860 437 ntTSL 317.9■□□□□ 0.461e-6■■□□□ 13.8
LARP4Q71RC2 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.79■□□□□ 0.441e-6■■□□□ 13.8
LARP4Q71RC2 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.72■□□□□ 0.431e-6■■□□□ 13.8
LARP4Q71RC2 PTBP1-208ENST00000585956 767 ntTSL 317.62■□□□□ 0.411e-6■■□□□ 13.8
LARP4Q71RC2 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.363e-7■■□□□ 13.8
LARP4Q71RC2 CLOCK-210ENST00000513033 567 ntTSL 416.56■□□□□ 0.241e-6■■□□□ 13.8
LARP4Q71RC2 CLOCK-203ENST00000435527 746 ntTSL 316.56■□□□□ 0.241e-6■■□□□ 13.8
LARP4Q71RC2 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.231e-6■■□□□ 13.8
LARP4Q71RC2 FBXW4-202ENST00000457105 630 ntTSL 516.5■□□□□ 0.231e-6■■□□□ 13.8
LARP4Q71RC2 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC16.31■□□□□ 0.23e-7■■□□□ 13.8
LARP4Q71RC2 SEPT2-218ENST00000437066 574 ntTSL 416.06■□□□□ 0.161e-6■■□□□ 13.8
LARP4Q71RC2 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.04■□□□□ 0.161e-6■■□□□ 13.8
LARP4Q71RC2 TCF25-226ENST00000640279 2688 ntTSL 515.94■□□□□ 0.141e-6■■□□□ 13.8
LARP4Q71RC2 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.121e-6■■□□□ 13.8
LARP4Q71RC2 SEPT2-242ENST00000492978 775 ntTSL 315.81■□□□□ 0.121e-6■■□□□ 13.8
LARP4Q71RC2 SEPT2-213ENST00000428282 1005 ntTSL 315.81■□□□□ 0.121e-6■■□□□ 13.8
LARP4Q71RC2 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.121e-6■■□□□ 13.8
LARP4Q71RC2 TCF25-224ENST00000570116 1947 ntTSL 515.77■□□□□ 0.121e-6■■□□□ 13.8
LARP4Q71RC2 TCF25-220ENST00000567171 1535 ntTSL 215.7■□□□□ 0.11e-6■■□□□ 13.8
LARP4Q71RC2 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.11e-6■■□□□ 13.8
LARP4Q71RC2 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC15.1■□□□□ 0.015e-8■■□□□ 13.8
LARP4Q71RC2 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.012e-7■■□□□ 13.8
LARP4Q71RC2 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.023e-52■■□□□ 13.8
LARP4Q71RC2 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC14.58□□□□□ -0.081e-6■■□□□ 13.8
LARP4Q71RC2 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC14.49□□□□□ -0.091e-6■■□□□ 13.8
LARP4Q71RC2 CLOCK-208ENST00000509151 476 ntTSL 414.42□□□□□ -0.11e-6■■□□□ 13.8
LARP4Q71RC2 HNRNPL-213ENST00000601664 447 ntTSL 1 (best)14.32□□□□□ -0.121e-6■■□□□ 13.8
LARP4Q71RC2 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.171e-6■■□□□ 13.8
LARP4Q71RC2 PPP2R5C-227ENST00000557268 2013 ntTSL 213.58□□□□□ -0.245e-8■■□□□ 13.8
LARP4Q71RC2 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.251e-6■■□□□ 13.8
LARP4Q71RC2 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.261e-6■■□□□ 13.8
LARP4Q71RC2 SRSF5-201ENST00000394366 1638 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.323e-52■■□□□ 13.8
LARP4Q71RC2 SRSF5-215ENST00000556587 1863 ntTSL 1 (best)12.61□□□□□ -0.393e-52■■□□□ 13.8
LARP4Q71RC2 SON-203ENST00000381679 7860 ntTSL 5 BASIC12.49□□□□□ -0.419e-14■■□□□ 13.8
LARP4Q71RC2 TCEAL9-201ENST00000372656 992 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.451e-6■■□□□ 13.8
LARP4Q71RC2 TCEAL9-202ENST00000372661 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.451e-6■■□□□ 13.8
LARP4Q71RC2 SYNCRIP-201ENST00000355238 6449 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.471e-6■■□□□ 13.8
LARP4Q71RC2 HNRNPR-202ENST00000374612 2694 ntAPPRIS P3 TSL 5 BASIC11.78□□□□□ -0.521e-6■■□□□ 13.8
LARP4Q71RC2 HNRNPR-203ENST00000374616 2691 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.531e-6■■□□□ 13.8
LARP4Q71RC2 SRSF5-205ENST00000553635 1412 ntTSL 2 BASIC11.73□□□□□ -0.533e-52■■□□□ 13.8
LARP4Q71RC2 HNRNPR-201ENST00000302271 2629 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.561e-6■■□□□ 13.8
LARP4Q71RC2 SON-208ENST00000455528 8394 ntTSL 1 (best)11.51□□□□□ -0.579e-14■■□□□ 13.8
LARP4Q71RC2 SEPT2-204ENST00000391973 3701 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.571e-6■■□□□ 13.8
Retrieved 100 of 15,922 protein–RNA pairs in 629.3 ms