Protein–RNA interactions for Protein: Q5SQS7

SH2D4B, SH2 domain-containing protein 4B, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4BQ5SQS7 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
SH2D4BQ5SQS7 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SH2D4BQ5SQS7 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SH2D4BQ5SQS7 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SH2D4BQ5SQS7 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SH2D4BQ5SQS7 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
SH2D4BQ5SQS7 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SH2D4BQ5SQS7 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SH2D4BQ5SQS7 AC004911.1-201ENST00000416316 871 ntBASIC19.11■□□□□ 0.65
SH2D4BQ5SQS7 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC19.11■□□□□ 0.65
SH2D4BQ5SQS7 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC19.11■□□□□ 0.65
SH2D4BQ5SQS7 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC19.11■□□□□ 0.65
SH2D4BQ5SQS7 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SH2D4BQ5SQS7 HR-201ENST00000312841 5351 ntTSL 5 BASIC19.11■□□□□ 0.65
SH2D4BQ5SQS7 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC19.11■□□□□ 0.65
SH2D4BQ5SQS7 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
SH2D4BQ5SQS7 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.11■□□□□ 0.65
SH2D4BQ5SQS7 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SH2D4BQ5SQS7 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SH2D4BQ5SQS7 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
SH2D4BQ5SQS7 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SH2D4BQ5SQS7 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.11■□□□□ 0.65
SH2D4BQ5SQS7 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
SH2D4BQ5SQS7 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
SH2D4BQ5SQS7 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC19.11■□□□□ 0.65
SH2D4BQ5SQS7 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SH2D4BQ5SQS7 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SH2D4BQ5SQS7 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SH2D4BQ5SQS7 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SH2D4BQ5SQS7 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
SH2D4BQ5SQS7 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
SH2D4BQ5SQS7 NEFHP1-201ENST00000412845 2629 ntBASIC19.1■□□□□ 0.65
SH2D4BQ5SQS7 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SH2D4BQ5SQS7 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SH2D4BQ5SQS7 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SH2D4BQ5SQS7 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
SH2D4BQ5SQS7 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC19.1■□□□□ 0.65
SH2D4BQ5SQS7 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SH2D4BQ5SQS7 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SH2D4BQ5SQS7 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SH2D4BQ5SQS7 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC19.1■□□□□ 0.65
SH2D4BQ5SQS7 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SH2D4BQ5SQS7 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC19.1■□□□□ 0.65
SH2D4BQ5SQS7 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC19.1■□□□□ 0.65
SH2D4BQ5SQS7 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SH2D4BQ5SQS7 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.1■□□□□ 0.65
SH2D4BQ5SQS7 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.1■□□□□ 0.65
SH2D4BQ5SQS7 AL137784.2-201ENST00000607332 1000 ntBASIC19.1■□□□□ 0.65
SH2D4BQ5SQS7 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SH2D4BQ5SQS7 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.1■□□□□ 0.65
SH2D4BQ5SQS7 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SH2D4BQ5SQS7 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.1■□□□□ 0.65
SH2D4BQ5SQS7 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.1■□□□□ 0.65
SH2D4BQ5SQS7 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
SH2D4BQ5SQS7 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
SH2D4BQ5SQS7 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SH2D4BQ5SQS7 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC19.09■□□□□ 0.65
SH2D4BQ5SQS7 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SH2D4BQ5SQS7 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SH2D4BQ5SQS7 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SH2D4BQ5SQS7 APTR-203ENST00000430801 583 ntTSL 5 BASIC19.09■□□□□ 0.65
SH2D4BQ5SQS7 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SH2D4BQ5SQS7 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SH2D4BQ5SQS7 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC19.09■□□□□ 0.65
SH2D4BQ5SQS7 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SH2D4BQ5SQS7 AC092437.1-201ENST00000624794 1048 ntBASIC19.09■□□□□ 0.65
SH2D4BQ5SQS7 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.09■□□□□ 0.65
SH2D4BQ5SQS7 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
SH2D4BQ5SQS7 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
SH2D4BQ5SQS7 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC19.09■□□□□ 0.65
SH2D4BQ5SQS7 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19.09■□□□□ 0.65
SH2D4BQ5SQS7 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.09■□□□□ 0.65
SH2D4BQ5SQS7 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.09■□□□□ 0.65
SH2D4BQ5SQS7 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC19.09■□□□□ 0.65
SH2D4BQ5SQS7 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.09■□□□□ 0.65
SH2D4BQ5SQS7 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
SH2D4BQ5SQS7 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
SH2D4BQ5SQS7 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
SH2D4BQ5SQS7 AC010980.2-201ENST00000587099 1412 ntBASIC19.08■□□□□ 0.65
SH2D4BQ5SQS7 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
SH2D4BQ5SQS7 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC19.08■□□□□ 0.65
SH2D4BQ5SQS7 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SH2D4BQ5SQS7 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SH2D4BQ5SQS7 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SH2D4BQ5SQS7 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SH2D4BQ5SQS7 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SH2D4BQ5SQS7 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
SH2D4BQ5SQS7 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SH2D4BQ5SQS7 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.08■□□□□ 0.65
SH2D4BQ5SQS7 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SH2D4BQ5SQS7 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SH2D4BQ5SQS7 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SH2D4BQ5SQS7 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC19.08■□□□□ 0.64
SH2D4BQ5SQS7 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC19.08■□□□□ 0.64
SH2D4BQ5SQS7 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC19.08■□□□□ 0.64
SH2D4BQ5SQS7 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SH2D4BQ5SQS7 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.08■□□□□ 0.64
SH2D4BQ5SQS7 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
SH2D4BQ5SQS7 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SH2D4BQ5SQS7 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms