Protein–RNA interactions for Protein: Q5RL73

RBM48, RNA-binding protein 48, humanhuman

Known RBP Predictions only

Length 367 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBM48Q5RL73 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RBM48Q5RL73 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RBM48Q5RL73 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RBM48Q5RL73 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
RBM48Q5RL73 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
RBM48Q5RL73 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RBM48Q5RL73 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RBM48Q5RL73 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RBM48Q5RL73 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
RBM48Q5RL73 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RBM48Q5RL73 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RBM48Q5RL73 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RBM48Q5RL73 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
RBM48Q5RL73 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RBM48Q5RL73 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC17.62■□□□□ 0.41
RBM48Q5RL73 KRT18P20-201ENST00000548986 1279 ntBASIC17.62■□□□□ 0.41
RBM48Q5RL73 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
RBM48Q5RL73 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC17.62■□□□□ 0.41
RBM48Q5RL73 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC17.62■□□□□ 0.41
RBM48Q5RL73 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RBM48Q5RL73 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RBM48Q5RL73 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RBM48Q5RL73 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RBM48Q5RL73 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RBM48Q5RL73 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RBM48Q5RL73 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RBM48Q5RL73 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.62■□□□□ 0.41
RBM48Q5RL73 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RBM48Q5RL73 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RBM48Q5RL73 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.62■□□□□ 0.41
RBM48Q5RL73 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
RBM48Q5RL73 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RBM48Q5RL73 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RBM48Q5RL73 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
RBM48Q5RL73 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RBM48Q5RL73 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RBM48Q5RL73 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.61■□□□□ 0.41
RBM48Q5RL73 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.61■□□□□ 0.41
RBM48Q5RL73 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RBM48Q5RL73 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
RBM48Q5RL73 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
RBM48Q5RL73 AC008764.6-201ENST00000595909 2069 ntBASIC17.61■□□□□ 0.41
RBM48Q5RL73 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RBM48Q5RL73 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
RBM48Q5RL73 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.61■□□□□ 0.41
RBM48Q5RL73 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RBM48Q5RL73 VMO1-204ENST00000441199 741 ntTSL 2 BASIC17.61■□□□□ 0.41
RBM48Q5RL73 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC17.61■□□□□ 0.41
RBM48Q5RL73 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC17.61■□□□□ 0.41
RBM48Q5RL73 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC17.61■□□□□ 0.41
RBM48Q5RL73 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RBM48Q5RL73 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RBM48Q5RL73 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RBM48Q5RL73 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RBM48Q5RL73 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RBM48Q5RL73 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RBM48Q5RL73 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC17.61■□□□□ 0.41
RBM48Q5RL73 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC17.61■□□□□ 0.41
RBM48Q5RL73 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RBM48Q5RL73 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RBM48Q5RL73 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RBM48Q5RL73 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC17.61■□□□□ 0.41
RBM48Q5RL73 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RBM48Q5RL73 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
RBM48Q5RL73 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC17.61■□□□□ 0.41
RBM48Q5RL73 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RBM48Q5RL73 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
RBM48Q5RL73 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC17.61■□□□□ 0.41
RBM48Q5RL73 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
RBM48Q5RL73 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RBM48Q5RL73 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
RBM48Q5RL73 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.6■□□□□ 0.41
RBM48Q5RL73 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RBM48Q5RL73 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
RBM48Q5RL73 AC139713.2-201ENST00000641328 2723 ntBASIC17.6■□□□□ 0.41
RBM48Q5RL73 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RBM48Q5RL73 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RBM48Q5RL73 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RBM48Q5RL73 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RBM48Q5RL73 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RBM48Q5RL73 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
RBM48Q5RL73 HLA-G-202ENST00000376815 851 ntBASIC17.6■□□□□ 0.41
RBM48Q5RL73 HLA-G-203ENST00000376818 1127 ntBASIC17.6■□□□□ 0.41
RBM48Q5RL73 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC17.6■□□□□ 0.41
RBM48Q5RL73 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC17.6■□□□□ 0.41
RBM48Q5RL73 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC17.6■□□□□ 0.41
RBM48Q5RL73 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RBM48Q5RL73 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
RBM48Q5RL73 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RBM48Q5RL73 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.6■□□□□ 0.41
RBM48Q5RL73 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.6■□□□□ 0.41
RBM48Q5RL73 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RBM48Q5RL73 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.6■□□□□ 0.41
RBM48Q5RL73 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.6■□□□□ 0.41
RBM48Q5RL73 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.6■□□□□ 0.41
RBM48Q5RL73 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.6■□□□□ 0.41
RBM48Q5RL73 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.6■□□□□ 0.41
RBM48Q5RL73 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
RBM48Q5RL73 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
RBM48Q5RL73 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms