Protein–RNA interactions for Protein: Q52M75

LINC01554, Putative uncharacterized protein encoded by LINC01554, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554Q52M75 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
LINC01554Q52M75 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
LINC01554Q52M75 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
LINC01554Q52M75 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
LINC01554Q52M75 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
LINC01554Q52M75 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
LINC01554Q52M75 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
LINC01554Q52M75 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
LINC01554Q52M75 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC9.7□□□□□ -0.86
LINC01554Q52M75 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
LINC01554Q52M75 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
LINC01554Q52M75 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC9.7□□□□□ -0.86
LINC01554Q52M75 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC9.7□□□□□ -0.86
LINC01554Q52M75 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
LINC01554Q52M75 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
LINC01554Q52M75 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
LINC01554Q52M75 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC9.69□□□□□ -0.86
LINC01554Q52M75 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
LINC01554Q52M75 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
LINC01554Q52M75 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC9.69□□□□□ -0.86
LINC01554Q52M75 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC9.69□□□□□ -0.86
LINC01554Q52M75 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
LINC01554Q52M75 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
LINC01554Q52M75 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
LINC01554Q52M75 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
LINC01554Q52M75 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
LINC01554Q52M75 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
LINC01554Q52M75 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC9.69□□□□□ -0.86
LINC01554Q52M75 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
LINC01554Q52M75 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC9.69□□□□□ -0.86
LINC01554Q52M75 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
LINC01554Q52M75 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC9.69□□□□□ -0.86
LINC01554Q52M75 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
LINC01554Q52M75 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
LINC01554Q52M75 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC9.69□□□□□ -0.86
LINC01554Q52M75 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
LINC01554Q52M75 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC9.69□□□□□ -0.86
LINC01554Q52M75 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC9.69□□□□□ -0.86
LINC01554Q52M75 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC9.69□□□□□ -0.86
LINC01554Q52M75 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC9.69□□□□□ -0.86
LINC01554Q52M75 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
LINC01554Q52M75 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC9.69□□□□□ -0.86
LINC01554Q52M75 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC9.69□□□□□ -0.86
LINC01554Q52M75 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
LINC01554Q52M75 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
LINC01554Q52M75 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
LINC01554Q52M75 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
LINC01554Q52M75 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC9.69□□□□□ -0.86
LINC01554Q52M75 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
LINC01554Q52M75 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC9.69□□□□□ -0.86
LINC01554Q52M75 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
LINC01554Q52M75 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
LINC01554Q52M75 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
LINC01554Q52M75 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC9.69□□□□□ -0.86
LINC01554Q52M75 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
LINC01554Q52M75 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC9.69□□□□□ -0.86
LINC01554Q52M75 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
LINC01554Q52M75 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC9.69□□□□□ -0.86
LINC01554Q52M75 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
LINC01554Q52M75 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
LINC01554Q52M75 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC9.69□□□□□ -0.86
LINC01554Q52M75 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC9.69□□□□□ -0.86
LINC01554Q52M75 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
LINC01554Q52M75 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
LINC01554Q52M75 PCDH8P1-201ENST00000428983 2773 ntBASIC9.69□□□□□ -0.86
LINC01554Q52M75 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC9.69□□□□□ -0.86
LINC01554Q52M75 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC9.69□□□□□ -0.86
LINC01554Q52M75 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
LINC01554Q52M75 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC9.69□□□□□ -0.86
LINC01554Q52M75 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC9.68□□□□□ -0.86
LINC01554Q52M75 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC9.68□□□□□ -0.86
LINC01554Q52M75 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
LINC01554Q52M75 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC9.68□□□□□ -0.86
LINC01554Q52M75 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
LINC01554Q52M75 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC9.68□□□□□ -0.86
LINC01554Q52M75 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
LINC01554Q52M75 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC9.68□□□□□ -0.86
LINC01554Q52M75 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
LINC01554Q52M75 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
LINC01554Q52M75 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
LINC01554Q52M75 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
LINC01554Q52M75 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
LINC01554Q52M75 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC9.68□□□□□ -0.86
LINC01554Q52M75 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
LINC01554Q52M75 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC9.68□□□□□ -0.86
LINC01554Q52M75 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC9.68□□□□□ -0.86
LINC01554Q52M75 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
LINC01554Q52M75 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
LINC01554Q52M75 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC9.68□□□□□ -0.86
LINC01554Q52M75 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
LINC01554Q52M75 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
LINC01554Q52M75 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
LINC01554Q52M75 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC9.68□□□□□ -0.86
LINC01554Q52M75 AC021242.3-201ENST00000607598 1377 ntBASIC9.68□□□□□ -0.86
LINC01554Q52M75 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC9.68□□□□□ -0.86
LINC01554Q52M75 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
LINC01554Q52M75 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
LINC01554Q52M75 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC9.68□□□□□ -0.86
LINC01554Q52M75 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC9.68□□□□□ -0.86
LINC01554Q52M75 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC9.68□□□□□ -0.86
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms