Protein–RNA interactions for Protein: Q08722

CD47, Leukocyte surface antigen CD47, humanhuman

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD47Q08722 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CD47Q08722 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CD47Q08722 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CD47Q08722 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CD47Q08722 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CD47Q08722 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC17.92■□□□□ 0.46
CD47Q08722 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CD47Q08722 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC17.92■□□□□ 0.46
CD47Q08722 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CD47Q08722 AC080038.1-201ENST00000611274 1154 ntBASIC17.92■□□□□ 0.46
CD47Q08722 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CD47Q08722 AC105020.6-201ENST00000621523 1217 ntBASIC17.92■□□□□ 0.46
CD47Q08722 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC17.92■□□□□ 0.46
CD47Q08722 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CD47Q08722 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CD47Q08722 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
CD47Q08722 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC17.92■□□□□ 0.46
CD47Q08722 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CD47Q08722 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CD47Q08722 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CD47Q08722 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CD47Q08722 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CD47Q08722 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CD47Q08722 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CD47Q08722 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CD47Q08722 KRT8P17-201ENST00000453110 1448 ntBASIC17.91■□□□□ 0.46
CD47Q08722 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CD47Q08722 AP000997.3-201ENST00000623333 2250 ntBASIC17.91■□□□□ 0.46
CD47Q08722 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CD47Q08722 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CD47Q08722 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CD47Q08722 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CD47Q08722 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC17.91■□□□□ 0.46
CD47Q08722 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CD47Q08722 KRT18P68-201ENST00000392293 1000 ntBASIC17.91■□□□□ 0.46
CD47Q08722 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC17.91■□□□□ 0.46
CD47Q08722 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CD47Q08722 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC17.91■□□□□ 0.46
CD47Q08722 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC17.91■□□□□ 0.46
CD47Q08722 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CD47Q08722 OR10C1-204ENST00000622521 1039 ntBASIC17.91■□□□□ 0.46
CD47Q08722 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
CD47Q08722 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CD47Q08722 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CD47Q08722 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CD47Q08722 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CD47Q08722 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CD47Q08722 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CD47Q08722 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CD47Q08722 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CD47Q08722 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CD47Q08722 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CD47Q08722 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.9■□□□□ 0.46
CD47Q08722 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CD47Q08722 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CD47Q08722 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CD47Q08722 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CD47Q08722 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CD47Q08722 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.9■□□□□ 0.46
CD47Q08722 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
CD47Q08722 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CD47Q08722 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CD47Q08722 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CD47Q08722 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
CD47Q08722 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CD47Q08722 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.9■□□□□ 0.46
CD47Q08722 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.9■□□□□ 0.46
CD47Q08722 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CD47Q08722 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.9■□□□□ 0.46
CD47Q08722 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
CD47Q08722 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CD47Q08722 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CD47Q08722 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CD47Q08722 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC17.9■□□□□ 0.46
CD47Q08722 AL355472.2-201ENST00000422958 438 ntBASIC17.9■□□□□ 0.46
CD47Q08722 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
CD47Q08722 CYP2T3P-201ENST00000601990 817 ntBASIC17.9■□□□□ 0.46
CD47Q08722 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC17.9■□□□□ 0.46
CD47Q08722 AC073111.5-205ENST00000641717 521 ntBASIC17.9■□□□□ 0.46
CD47Q08722 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CD47Q08722 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CD47Q08722 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CD47Q08722 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.9■□□□□ 0.46
CD47Q08722 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CD47Q08722 FZD10-202ENST00000539839 3282 ntBASIC17.9■□□□□ 0.46
CD47Q08722 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
CD47Q08722 NOC2LP2-201ENST00000407594 1944 ntBASIC17.9■□□□□ 0.46
CD47Q08722 GCK-205ENST00000437084 1385 ntTSL 5 BASIC17.9■□□□□ 0.46
CD47Q08722 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.9■□□□□ 0.46
CD47Q08722 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CD47Q08722 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.9■□□□□ 0.46
CD47Q08722 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CD47Q08722 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CD47Q08722 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CD47Q08722 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CD47Q08722 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.9■□□□□ 0.46
CD47Q08722 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CD47Q08722 BICD1-207ENST00000551848 1962 ntBASIC17.9■□□□□ 0.46
CD47Q08722 HCG11-201ENST00000411553 5696 ntBASIC17.89■□□□□ 0.46
CD47Q08722 KRT16P6-202ENST00000425692 1426 ntBASIC17.89■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms