Protein–RNA interactions for Protein: P53708

ITGA8, Integrin alpha-8, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA8P53708 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
ITGA8P53708 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ITGA8P53708 AC073210.2-201ENST00000430369 194 ntBASIC19.8■□□□□ 0.76
ITGA8P53708 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC19.8■□□□□ 0.76
ITGA8P53708 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
ITGA8P53708 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ITGA8P53708 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ITGA8P53708 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ITGA8P53708 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ITGA8P53708 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.8■□□□□ 0.76
ITGA8P53708 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ITGA8P53708 AC124283.5-201ENST00000624661 1809 ntBASIC19.8■□□□□ 0.76
ITGA8P53708 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ITGA8P53708 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ITGA8P53708 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
ITGA8P53708 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.8■□□□□ 0.76
ITGA8P53708 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
ITGA8P53708 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ITGA8P53708 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
ITGA8P53708 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ITGA8P53708 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.79■□□□□ 0.76
ITGA8P53708 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ITGA8P53708 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.79■□□□□ 0.76
ITGA8P53708 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ITGA8P53708 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ITGA8P53708 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC19.79■□□□□ 0.76
ITGA8P53708 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ITGA8P53708 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ITGA8P53708 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
ITGA8P53708 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ITGA8P53708 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.79■□□□□ 0.76
ITGA8P53708 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
ITGA8P53708 BX276092.2-201ENST00000417668 665 ntBASIC19.79■□□□□ 0.76
ITGA8P53708 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC19.79■□□□□ 0.76
ITGA8P53708 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC19.79■□□□□ 0.76
ITGA8P53708 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ITGA8P53708 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC19.79■□□□□ 0.76
ITGA8P53708 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC19.79■□□□□ 0.76
ITGA8P53708 MARS-234ENST00000630571 216 ntTSL 5 BASIC19.79■□□□□ 0.76
ITGA8P53708 MARS-235ENST00000630803 183 ntTSL 3 BASIC19.79■□□□□ 0.76
ITGA8P53708 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.79■□□□□ 0.76
ITGA8P53708 WIZP1-201ENST00000531444 2299 ntBASIC19.79■□□□□ 0.76
ITGA8P53708 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ITGA8P53708 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ITGA8P53708 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ITGA8P53708 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
ITGA8P53708 CRK-204ENST00000574295 1391 ntTSL 5 BASIC19.79■□□□□ 0.76
ITGA8P53708 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ITGA8P53708 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
ITGA8P53708 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ITGA8P53708 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ITGA8P53708 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
ITGA8P53708 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
ITGA8P53708 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.78■□□□□ 0.76
ITGA8P53708 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
ITGA8P53708 AC005082.1-201ENST00000413042 2259 ntBASIC19.78■□□□□ 0.76
ITGA8P53708 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
ITGA8P53708 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC19.78■□□□□ 0.76
ITGA8P53708 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
ITGA8P53708 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ITGA8P53708 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ITGA8P53708 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ITGA8P53708 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.78■□□□□ 0.76
ITGA8P53708 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ITGA8P53708 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.78■□□□□ 0.76
ITGA8P53708 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
ITGA8P53708 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ITGA8P53708 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.78■□□□□ 0.76
ITGA8P53708 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
ITGA8P53708 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ITGA8P53708 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ITGA8P53708 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC19.78■□□□□ 0.76
ITGA8P53708 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ITGA8P53708 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19.78■□□□□ 0.76
ITGA8P53708 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
ITGA8P53708 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ITGA8P53708 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
ITGA8P53708 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ITGA8P53708 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ITGA8P53708 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
ITGA8P53708 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ITGA8P53708 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
ITGA8P53708 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ITGA8P53708 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ITGA8P53708 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
ITGA8P53708 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.77■□□□□ 0.76
ITGA8P53708 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
ITGA8P53708 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.77■□□□□ 0.76
ITGA8P53708 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC19.77■□□□□ 0.76
ITGA8P53708 AC105036.2-201ENST00000569468 176 ntBASIC19.77■□□□□ 0.76
ITGA8P53708 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.77■□□□□ 0.76
ITGA8P53708 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
ITGA8P53708 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC19.77■□□□□ 0.76
ITGA8P53708 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
ITGA8P53708 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
ITGA8P53708 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
ITGA8P53708 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
ITGA8P53708 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
ITGA8P53708 AC093525.10-201ENST00000625130 1569 ntBASIC19.77■□□□□ 0.76
ITGA8P53708 GOLGA6L3-201ENST00000507199 1679 ntBASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms