Protein–RNA interactions for Protein: P52298

NCBP2, Nuclear cap-binding protein subunit 2, humanhuman

Known RBP eCLIP

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2P52298 PVT1-201ENST00000504719 754 ntTSL 223.17■■□□□ 1.35e-7■■□□□ 13.7
NCBP2P52298 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC22.6■■□□□ 1.215e-7■■□□□ 13.7
NCBP2P52298 PVT1-204ENST00000517525 392 ntTSL 322.57■■□□□ 1.25e-7■■□□□ 13.7
NCBP2P52298 PVT1-218ENST00000523328 343 ntTSL 1 (best)20.3■□□□□ 0.845e-7■■□□□ 13.7
NCBP2P52298 PVT1-220ENST00000524165 458 ntTSL 215.16■□□□□ 0.025e-7■■□□□ 13.7
NCBP2P52298 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.364e-13■■□□□ 13.7
NCBP2P52298 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.14e-13■■□□□ 13.7
NCBP2P52298 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.654e-13■■□□□ 13.7
NCBP2P52298 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.064e-13■■□□□ 13.7
NCBP2P52298 WASHC4-201ENST00000311317 2897 ntTSL 214.07□□□□□ -0.161e-15■■□□□ 13.7
NCBP2P52298 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.22e-6■■□□□ 13.7
NCBP2P52298 TBCE-206ENST00000482230 1050 ntTSL 513.55□□□□□ -0.242e-6■■□□□ 13.7
NCBP2P52298 TBCE-205ENST00000472011 1840 ntTSL 213.49□□□□□ -0.252e-6■■□□□ 13.7
NCBP2P52298 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.332e-6■■□□□ 13.7
NCBP2P52298 WASHC4-204ENST00000547404 719 ntTSL 512.95□□□□□ -0.341e-15■■□□□ 13.7
NCBP2P52298 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.392e-6■■□□□ 13.7
NCBP2P52298 SRSF7-206ENST00000431066 1847 ntTSL 510.37□□□□□ -0.756e-19■■□□□ 13.7
NCBP2P52298 RNA5SP389-201ENST00000362610 115 ntBASIC7.24□□□□□ -1.252e-6■■□□□ 13.7
NCBP2P52298 WASHC4-208ENST00000550053 5819 ntTSL 56.92□□□□□ -1.31e-15■■□□□ 13.7
NCBP2P52298 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.491e-15■■□□□ 13.7
NCBP2P52298 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.521e-15■■□□□ 13.7
NCBP2P52298 ELL2-208ENST00000635633 467 ntTSL 34.87□□□□□ -1.638e-21■■□□□ 13.7
NCBP2P52298 WASHC4-205ENST00000548195 576 ntTSL 44.57□□□□□ -1.681e-15■■□□□ 13.7
NCBP2P52298 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.34e-7■■□□□ 13.7
NCBP2P52298 ARHGEF10L-202ENST00000361221 4488 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.41e-14■■□□□ 13.7
NCBP2P52298 RN7SKP160-201ENST00000363804 340 ntBASIC4.88□□□□□ -1.632e-12■■□□□ 13.7
NCBP2P52298 INTS6-201ENST00000311234 3662 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.44e-18■■□□□ 13.6
NCBP2P52298 INTS6-209ENST00000483288 597 ntTSL 48.07□□□□□ -1.124e-18■■□□□ 13.6
NCBP2P52298 INTS6-202ENST00000398119 7041 ntTSL 1 (best) BASIC7.74□□□□□ -1.174e-18■■□□□ 13.6
NCBP2P52298 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC6.53□□□□□ -1.364e-18■■□□□ 13.6
NCBP2P52298 INTS6-212ENST00000485178 474 ntTSL 53.76□□□□□ -1.814e-18■■□□□ 13.6
NCBP2P52298 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC22.69■■□□□ 1.221e-6■■□□□ 13.6
NCBP2P52298 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.181e-6■■□□□ 13.6
NCBP2P52298 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC18.33■□□□□ 0.521e-6■■□□□ 13.6
NCBP2P52298 NREP-220ENST00000513100 557 ntTSL 414□□□□□ -0.171e-6■■□□□ 13.6
NCBP2P52298 NREP-212ENST00000505864 701 ntTSL 39.74□□□□□ -0.851e-6■■□□□ 13.6
NCBP2P52298 NREP-215ENST00000508161 475 ntTSL 39.74□□□□□ -0.851e-6■■□□□ 13.6
NCBP2P52298 NREP-213ENST00000507032 311 ntTSL 59.6□□□□□ -0.871e-6■■□□□ 13.6
NCBP2P52298 NREP-203ENST00000395634 1468 ntTSL 2 BASIC8.98□□□□□ -0.971e-6■■□□□ 13.6
NCBP2P52298 NREP-219ENST00000509979 771 ntTSL 4 BASIC8.4□□□□□ -1.061e-6■■□□□ 13.6
NCBP2P52298 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC3.6□□□□□ -1.831e-6■■□□□ 13.6
NCBP2P52298 MKL1-208ENST00000466278 577 ntTSL 320.85■□□□□ 0.932e-6■■□□□ 13.6
NCBP2P52298 MKL1-207ENST00000463769 531 ntTSL 1 (best)15.85■□□□□ 0.132e-6■■□□□ 13.6
NCBP2P52298 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC13.79□□□□□ -0.22e-6■■□□□ 13.6
NCBP2P52298 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC13.38□□□□□ -0.272e-6■■□□□ 13.6
NCBP2P52298 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC13.11□□□□□ -0.312e-6■■□□□ 13.6
NCBP2P52298 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC13.74□□□□□ -0.212e-8■■□□□ 13.6
NCBP2P52298 CLCN6-204ENST00000376491 927 ntTSL 1 (best)13.46□□□□□ -0.252e-8■■□□□ 13.6
NCBP2P52298 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC13.37□□□□□ -0.272e-8■■□□□ 13.6
NCBP2P52298 CLCN6-203ENST00000376490 963 ntTSL 1 (best)13.08□□□□□ -0.322e-8■■□□□ 13.6
NCBP2P52298 CLCN6-206ENST00000376496 2922 ntTSL 5 BASIC11.92□□□□□ -0.52e-8■■□□□ 13.6
NCBP2P52298 CLCN6-205ENST00000376492 1062 ntTSL 1 (best)11.82□□□□□ -0.522e-8■■□□□ 13.6
NCBP2P52298 CLCN6-202ENST00000346436 5583 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.732e-8■■□□□ 13.6
NCBP2P52298 SAMD4B-212ENST00000602243 672 ntTSL 322.04■■□□□ 1.121e-8■■□□□ 13.6
NCBP2P52298 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.021e-8■■□□□ 13.6
NCBP2P52298 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.161e-8■■□□□ 13.6
NCBP2P52298 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.141e-8■■□□□ 13.6
NCBP2P52298 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.161e-8■■□□□ 13.6
NCBP2P52298 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.221e-8■■□□□ 13.6
NCBP2P52298 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.231e-8■■□□□ 13.6
NCBP2P52298 TCOF1-215ENST00000515516 661 ntTSL 512.48□□□□□ -0.411e-8■■□□□ 13.6
NCBP2P52298 TCOF1-205ENST00000439160 4644 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.491e-8■■□□□ 13.6
NCBP2P52298 TCOF1-211ENST00000513346 4646 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.71e-8■■□□□ 13.6
NCBP2P52298 TCOF1-203ENST00000394269 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.711e-8■■□□□ 13.6
NCBP2P52298 TCOF1-204ENST00000427724 4272 ntAPPRIS ALT2 TSL 510.21□□□□□ -0.771e-8■■□□□ 13.6
NCBP2P52298 PCF11-203ENST00000530304 2649 ntTSL 1 (best)18.36■□□□□ 0.535e-10■■□□□ 13.6
NCBP2P52298 PCF11-207ENST00000624931 1720 nt16.29■□□□□ 0.25e-10■■□□□ 13.6
NCBP2P52298 PCF11-206ENST00000533018 580 ntTSL 316.18■□□□□ 0.185e-10■■□□□ 13.6
NCBP2P52298 PCF11-204ENST00000530660 3309 ntTSL 212.8□□□□□ -0.365e-10■■□□□ 13.6
NCBP2P52298 PCF11-201ENST00000298281 7677 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.535e-10■■□□□ 13.6
NCBP2P52298 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.484e-8■■□□□ 13.6
NCBP2P52298 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC15.24■□□□□ 0.033e-22■■□□□ 13.6
NCBP2P52298 ADAMTSL4-205ENST00000483335 1826 ntTSL 1 (best)14.92□□□□□ -0.023e-22■■□□□ 13.6
NCBP2P52298 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.253e-22■■□□□ 13.6
NCBP2P52298 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.273e-22■■□□□ 13.6
NCBP2P52298 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC24.66■■□□□ 1.543e-8■■□□□ 13.6
NCBP2P52298 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC24.53■■□□□ 1.523e-8■■□□□ 13.6
NCBP2P52298 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.773e-8■■□□□ 13.6
NCBP2P52298 ARHGEF7-216ENST00000483540 557 ntTSL 419.76■□□□□ 0.753e-8■■□□□ 13.6
NCBP2P52298 ARHGEF7-210ENST00000449979 682 ntTSL 515.02■□□□□ -03e-8■■□□□ 13.6
NCBP2P52298 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC13.82□□□□□ -0.23e-8■■□□□ 13.6
NCBP2P52298 ARHGEF7-211ENST00000466143 1681 ntTSL 513.01□□□□□ -0.333e-8■■□□□ 13.6
NCBP2P52298 ARHGEF7-213ENST00000469877 1501 ntTSL 211.57□□□□□ -0.563e-8■■□□□ 13.6
NCBP2P52298 ARHGEF7-218ENST00000491775 581 ntTSL 410.58□□□□□ -0.723e-8■■□□□ 13.6
NCBP2P52298 WWP1-210ENST00000523863 796 ntTSL 318.25■□□□□ 0.513e-10■■□□□ 13.6
NCBP2P52298 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.393e-10■■□□□ 13.6
NCBP2P52298 HP1BP3-209ENST00000437575 473 ntTSL 323.28■■□□□ 1.322e-6■■□□□ 13.6
NCBP2P52298 HP1BP3-210ENST00000438032 1159 ntTSL 518.36■□□□□ 0.532e-6■■□□□ 13.6
NCBP2P52298 HP1BP3-208ENST00000424732 970 ntTSL 316.42■□□□□ 0.222e-6■■□□□ 13.6
NCBP2P52298 XYLB-203ENST00000427323 1666 ntTSL 2 BASIC12.26□□□□□ -0.457e-10■■□□□ 13.6
NCBP2P52298 XYLB-201ENST00000207870 3664 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.87e-10■■□□□ 13.6
NCBP2P52298 XYLB-202ENST00000424034 3484 ntTSL 28.78□□□□□ -17e-10■■□□□ 13.6
NCBP2P52298 STX16-210ENST00000458280 553 ntTSL 420.04■□□□□ 0.88e-18■■□□□ 13.6
NCBP2P52298 STX16-208ENST00000412911 560 ntTSL 415.76■□□□□ 0.118e-18■■□□□ 13.6
NCBP2P52298 STX16-217ENST00000490700 661 ntTSL 314.72□□□□□ -0.058e-18■■□□□ 13.6
NCBP2P52298 STX16-201ENST00000312283 785 ntTSL 313.98□□□□□ -0.178e-18■■□□□ 13.6
NCBP2P52298 STX16-215ENST00000476384 936 ntTSL 513.96□□□□□ -0.178e-18■■□□□ 13.6
NCBP2P52298 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC13.55□□□□□ -0.248e-18■■□□□ 13.6
NCBP2P52298 STX16-216ENST00000483434 874 ntTSL 313.04□□□□□ -0.328e-18■■□□□ 13.6
NCBP2P52298 STX16-211ENST00000460655 572 ntTSL 412.16□□□□□ -0.468e-18■■□□□ 13.6
Retrieved 100 of 18,329 protein–RNA pairs in 264.1 ms