Protein–RNA interactions for Protein: P50213

IDH3A, Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3AP50213 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.77■□□□□ 0.6
IDH3AP50213 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
IDH3AP50213 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
IDH3AP50213 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
IDH3AP50213 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC18.77■□□□□ 0.6
IDH3AP50213 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
IDH3AP50213 MOK-233ENST00000524214 1539 ntTSL 2 BASIC18.77■□□□□ 0.6
IDH3AP50213 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.77■□□□□ 0.6
IDH3AP50213 AC104417.2-201ENST00000562989 1793 ntBASIC18.77■□□□□ 0.6
IDH3AP50213 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
IDH3AP50213 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
IDH3AP50213 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
IDH3AP50213 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
IDH3AP50213 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
IDH3AP50213 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
IDH3AP50213 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
IDH3AP50213 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
IDH3AP50213 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
IDH3AP50213 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
IDH3AP50213 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
IDH3AP50213 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
IDH3AP50213 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
IDH3AP50213 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
IDH3AP50213 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.76■□□□□ 0.59
IDH3AP50213 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
IDH3AP50213 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
IDH3AP50213 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
IDH3AP50213 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.76■□□□□ 0.59
IDH3AP50213 HACD1-201ENST00000326961 773 ntTSL 2 BASIC18.76■□□□□ 0.59
IDH3AP50213 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
IDH3AP50213 CYP2T1P-201ENST00000432607 1285 ntBASIC18.76■□□□□ 0.59
IDH3AP50213 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.76■□□□□ 0.59
IDH3AP50213 AC069236.1-201ENST00000604339 616 ntBASIC18.76■□□□□ 0.59
IDH3AP50213 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
IDH3AP50213 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
IDH3AP50213 NOC2LP2-201ENST00000407594 1944 ntBASIC18.76■□□□□ 0.59
IDH3AP50213 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.76■□□□□ 0.59
IDH3AP50213 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.76■□□□□ 0.59
IDH3AP50213 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
IDH3AP50213 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.76■□□□□ 0.59
IDH3AP50213 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
IDH3AP50213 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
IDH3AP50213 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
IDH3AP50213 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.76■□□□□ 0.59
IDH3AP50213 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.76■□□□□ 0.59
IDH3AP50213 NXN-202ENST00000537628 1340 ntTSL 3 BASIC18.75■□□□□ 0.59
IDH3AP50213 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
IDH3AP50213 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
IDH3AP50213 KRT17P1-201ENST00000399211 1546 ntBASIC18.75■□□□□ 0.59
IDH3AP50213 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
IDH3AP50213 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
IDH3AP50213 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
IDH3AP50213 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
IDH3AP50213 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
IDH3AP50213 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC18.75■□□□□ 0.59
IDH3AP50213 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.75■□□□□ 0.59
IDH3AP50213 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
IDH3AP50213 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
IDH3AP50213 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
IDH3AP50213 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
IDH3AP50213 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.75■□□□□ 0.59
IDH3AP50213 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
IDH3AP50213 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
IDH3AP50213 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
IDH3AP50213 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.75■□□□□ 0.59
IDH3AP50213 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.74■□□□□ 0.59
IDH3AP50213 AC010980.2-201ENST00000587099 1412 ntBASIC18.74■□□□□ 0.59
IDH3AP50213 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
IDH3AP50213 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.74■□□□□ 0.59
IDH3AP50213 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.74■□□□□ 0.59
IDH3AP50213 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
IDH3AP50213 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
IDH3AP50213 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
IDH3AP50213 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
IDH3AP50213 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
IDH3AP50213 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.74■□□□□ 0.59
IDH3AP50213 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.74■□□□□ 0.59
IDH3AP50213 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
IDH3AP50213 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
IDH3AP50213 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
IDH3AP50213 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.74■□□□□ 0.59
IDH3AP50213 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
IDH3AP50213 SERP1-205ENST00000487153 657 ntTSL 4 BASIC18.74■□□□□ 0.59
IDH3AP50213 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC18.74■□□□□ 0.59
IDH3AP50213 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC18.74■□□□□ 0.59
IDH3AP50213 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC18.74■□□□□ 0.59
IDH3AP50213 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
IDH3AP50213 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
IDH3AP50213 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.74■□□□□ 0.59
IDH3AP50213 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.74■□□□□ 0.59
IDH3AP50213 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.74■□□□□ 0.59
IDH3AP50213 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
IDH3AP50213 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
IDH3AP50213 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
IDH3AP50213 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
IDH3AP50213 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
IDH3AP50213 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
IDH3AP50213 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
IDH3AP50213 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
IDH3AP50213 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms