Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CLCN1P35523 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CLCN1P35523 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC21.91■■□□□ 1.1
CLCN1P35523 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
CLCN1P35523 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC21.91■■□□□ 1.1
CLCN1P35523 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
CLCN1P35523 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CLCN1P35523 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
CLCN1P35523 AC007322.3-201ENST00000426526 701 ntBASIC21.91■■□□□ 1.1
CLCN1P35523 AC006015.1-201ENST00000429970 570 ntBASIC21.91■■□□□ 1.1
CLCN1P35523 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
CLCN1P35523 KRT18P11-201ENST00000435214 1283 ntBASIC21.91■■□□□ 1.1
CLCN1P35523 MFSD11-216ENST00000590393 1141 ntBASIC21.91■■□□□ 1.1
CLCN1P35523 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CLCN1P35523 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC21.91■■□□□ 1.1
CLCN1P35523 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
CLCN1P35523 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC21.91■■□□□ 1.1
CLCN1P35523 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CLCN1P35523 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC21.91■■□□□ 1.1
CLCN1P35523 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC21.91■■□□□ 1.1
CLCN1P35523 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
CLCN1P35523 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CLCN1P35523 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC21.9■■□□□ 1.1
CLCN1P35523 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CLCN1P35523 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CLCN1P35523 AL031598.1-201ENST00000561511 1773 ntBASIC21.9■■□□□ 1.1
CLCN1P35523 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CLCN1P35523 SAPCD2P1-201ENST00000395413 1184 ntBASIC21.9■■□□□ 1.1
CLCN1P35523 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
CLCN1P35523 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC21.9■■□□□ 1.1
CLCN1P35523 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC21.9■■□□□ 1.1
CLCN1P35523 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CLCN1P35523 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC21.9■■□□□ 1.1
CLCN1P35523 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
CLCN1P35523 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC21.9■■□□□ 1.1
CLCN1P35523 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC21.9■■□□□ 1.1
CLCN1P35523 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CLCN1P35523 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
CLCN1P35523 BX119927.1-201ENST00000636596 1552 ntBASIC21.9■■□□□ 1.1
CLCN1P35523 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC21.9■■□□□ 1.1
CLCN1P35523 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CLCN1P35523 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC21.9■■□□□ 1.1
CLCN1P35523 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
CLCN1P35523 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CLCN1P35523 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CLCN1P35523 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
CLCN1P35523 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CLCN1P35523 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CLCN1P35523 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CLCN1P35523 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC21.89■■□□□ 1.1
CLCN1P35523 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC21.89■■□□□ 1.1
CLCN1P35523 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
CLCN1P35523 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
CLCN1P35523 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
CLCN1P35523 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CLCN1P35523 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC21.89■■□□□ 1.09
CLCN1P35523 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CLCN1P35523 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CLCN1P35523 CD276-201ENST00000318424 2738 ntTSL 5 BASIC21.89■■□□□ 1.09
CLCN1P35523 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CLCN1P35523 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CLCN1P35523 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CLCN1P35523 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC21.89■■□□□ 1.09
CLCN1P35523 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC21.88■■□□□ 1.09
CLCN1P35523 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
CLCN1P35523 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CLCN1P35523 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CLCN1P35523 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CLCN1P35523 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC21.88■■□□□ 1.09
CLCN1P35523 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC21.88■■□□□ 1.09
CLCN1P35523 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC21.88■■□□□ 1.09
CLCN1P35523 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CLCN1P35523 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC21.88■■□□□ 1.09
CLCN1P35523 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CLCN1P35523 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
CLCN1P35523 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC21.88■■□□□ 1.09
CLCN1P35523 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC21.88■■□□□ 1.09
CLCN1P35523 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
CLCN1P35523 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CLCN1P35523 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CLCN1P35523 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CLCN1P35523 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC21.88■■□□□ 1.09
CLCN1P35523 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC21.88■■□□□ 1.09
CLCN1P35523 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CLCN1P35523 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CLCN1P35523 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
CLCN1P35523 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC21.87■■□□□ 1.09
CLCN1P35523 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CLCN1P35523 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC21.87■■□□□ 1.09
CLCN1P35523 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC21.87■■□□□ 1.09
CLCN1P35523 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CLCN1P35523 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC21.87■■□□□ 1.09
CLCN1P35523 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
CLCN1P35523 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
CLCN1P35523 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CLCN1P35523 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
CLCN1P35523 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CLCN1P35523 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
CLCN1P35523 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
CLCN1P35523 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC21.87■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms