Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC17.1■□□□□ 0.33
ERCC1P07992 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC17.1■□□□□ 0.33
ERCC1P07992 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
ERCC1P07992 AL359736.2-201ENST00000621992 437 ntBASIC17.1■□□□□ 0.33
ERCC1P07992 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.1■□□□□ 0.33
ERCC1P07992 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ERCC1P07992 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ERCC1P07992 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.1■□□□□ 0.33
ERCC1P07992 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ERCC1P07992 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ERCC1P07992 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.1■□□□□ 0.33
ERCC1P07992 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
ERCC1P07992 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
ERCC1P07992 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ERCC1P07992 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ERCC1P07992 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ERCC1P07992 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ERCC1P07992 TNXA-203ENST00000507684 2038 ntBASIC17.09■□□□□ 0.33
ERCC1P07992 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ERCC1P07992 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.09■□□□□ 0.33
ERCC1P07992 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ERCC1P07992 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ERCC1P07992 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ERCC1P07992 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ERCC1P07992 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ERCC1P07992 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ERCC1P07992 PEX7-202ENST00000367756 680 ntTSL 3 BASIC17.09■□□□□ 0.33
ERCC1P07992 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ERCC1P07992 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ERCC1P07992 AC239809.2-201ENST00000415381 517 ntBASIC17.09■□□□□ 0.33
ERCC1P07992 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ERCC1P07992 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC17.09■□□□□ 0.33
ERCC1P07992 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC17.09■□□□□ 0.33
ERCC1P07992 RPS2P4-201ENST00000476944 856 ntBASIC17.09■□□□□ 0.33
ERCC1P07992 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ERCC1P07992 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ERCC1P07992 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC17.09■□□□□ 0.33
ERCC1P07992 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
ERCC1P07992 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
ERCC1P07992 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
ERCC1P07992 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC17.09■□□□□ 0.33
ERCC1P07992 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ERCC1P07992 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ERCC1P07992 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ERCC1P07992 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ERCC1P07992 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
ERCC1P07992 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ERCC1P07992 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ERCC1P07992 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.09■□□□□ 0.33
ERCC1P07992 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.09■□□□□ 0.33
ERCC1P07992 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ERCC1P07992 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ERCC1P07992 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.09■□□□□ 0.33
ERCC1P07992 AC004408.2-201ENST00000623613 2777 ntBASIC17.09■□□□□ 0.33
ERCC1P07992 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ERCC1P07992 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ERCC1P07992 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.09■□□□□ 0.33
ERCC1P07992 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
ERCC1P07992 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ERCC1P07992 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
ERCC1P07992 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
ERCC1P07992 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.08■□□□□ 0.33
ERCC1P07992 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC17.08■□□□□ 0.33
ERCC1P07992 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ERCC1P07992 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
ERCC1P07992 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
ERCC1P07992 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
ERCC1P07992 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
ERCC1P07992 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC17.08■□□□□ 0.33
ERCC1P07992 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ERCC1P07992 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ERCC1P07992 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ERCC1P07992 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ERCC1P07992 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ERCC1P07992 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ERCC1P07992 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ERCC1P07992 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC17.08■□□□□ 0.32
ERCC1P07992 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
ERCC1P07992 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC17.08■□□□□ 0.32
ERCC1P07992 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC17.08■□□□□ 0.32
ERCC1P07992 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC17.08■□□□□ 0.32
ERCC1P07992 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
ERCC1P07992 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.08■□□□□ 0.32
ERCC1P07992 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
ERCC1P07992 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
ERCC1P07992 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
ERCC1P07992 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ERCC1P07992 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ERCC1P07992 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ERCC1P07992 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
ERCC1P07992 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC17.07■□□□□ 0.32
ERCC1P07992 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ERCC1P07992 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ERCC1P07992 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ERCC1P07992 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ERCC1P07992 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
ERCC1P07992 MME-217ENST00000616757 1315 ntTSL 5 BASIC17.07■□□□□ 0.32
ERCC1P07992 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ERCC1P07992 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC17.07■□□□□ 0.32
ERCC1P07992 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms