Protein–RNA interactions for Protein: O95407

TNFRSF6B, Tumor necrosis factor receptor superfamily member 6B, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF6BO95407 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
TNFRSF6BO95407 EBPL-204ENST00000378272 766 ntTSL 3 BASIC14.03□□□□□ -0.16
TNFRSF6BO95407 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC14.03□□□□□ -0.16
TNFRSF6BO95407 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC14.03□□□□□ -0.16
TNFRSF6BO95407 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC14.03□□□□□ -0.16
TNFRSF6BO95407 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC14.03□□□□□ -0.16
TNFRSF6BO95407 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC14.03□□□□□ -0.16
TNFRSF6BO95407 MAG-206ENST00000597035 542 ntTSL 4 BASIC14.03□□□□□ -0.16
TNFRSF6BO95407 GRAMD4P4-201ENST00000613563 1115 ntBASIC14.03□□□□□ -0.16
TNFRSF6BO95407 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TNFRSF6BO95407 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC14.03□□□□□ -0.16
TNFRSF6BO95407 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TNFRSF6BO95407 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TNFRSF6BO95407 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC14.03□□□□□ -0.16
TNFRSF6BO95407 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC14.03□□□□□ -0.16
TNFRSF6BO95407 USP39-202ENST00000409025 1946 ntTSL 5 BASIC14.03□□□□□ -0.16
TNFRSF6BO95407 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
TNFRSF6BO95407 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
TNFRSF6BO95407 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TNFRSF6BO95407 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
TNFRSF6BO95407 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
TNFRSF6BO95407 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC14.03□□□□□ -0.16
TNFRSF6BO95407 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TNFRSF6BO95407 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
TNFRSF6BO95407 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TNFRSF6BO95407 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
TNFRSF6BO95407 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TNFRSF6BO95407 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TNFRSF6BO95407 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
TNFRSF6BO95407 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TNFRSF6BO95407 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
TNFRSF6BO95407 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
TNFRSF6BO95407 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TNFRSF6BO95407 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
TNFRSF6BO95407 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
TNFRSF6BO95407 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TNFRSF6BO95407 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TNFRSF6BO95407 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TNFRSF6BO95407 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC14.02□□□□□ -0.16
TNFRSF6BO95407 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC14.02□□□□□ -0.16
TNFRSF6BO95407 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.16
TNFRSF6BO95407 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
TNFRSF6BO95407 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TNFRSF6BO95407 IRS3P-201ENST00000223076 1006 ntBASIC14.02□□□□□ -0.17
TNFRSF6BO95407 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC14.02□□□□□ -0.17
TNFRSF6BO95407 VMO1-204ENST00000441199 741 ntTSL 2 BASIC14.02□□□□□ -0.17
TNFRSF6BO95407 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC14.02□□□□□ -0.17
TNFRSF6BO95407 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TNFRSF6BO95407 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC14.02□□□□□ -0.17
TNFRSF6BO95407 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TNFRSF6BO95407 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TNFRSF6BO95407 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
TNFRSF6BO95407 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
TNFRSF6BO95407 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TNFRSF6BO95407 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TNFRSF6BO95407 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
TNFRSF6BO95407 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC14.02□□□□□ -0.17
TNFRSF6BO95407 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TNFRSF6BO95407 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TNFRSF6BO95407 FP475955.4-201ENST00000623131 1990 ntBASIC14.02□□□□□ -0.17
TNFRSF6BO95407 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TNFRSF6BO95407 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TNFRSF6BO95407 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TNFRSF6BO95407 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC14.01□□□□□ -0.17
TNFRSF6BO95407 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC14.01□□□□□ -0.17
TNFRSF6BO95407 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TNFRSF6BO95407 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TNFRSF6BO95407 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC14.01□□□□□ -0.17
TNFRSF6BO95407 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TNFRSF6BO95407 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC14.01□□□□□ -0.17
TNFRSF6BO95407 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
TNFRSF6BO95407 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TNFRSF6BO95407 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TNFRSF6BO95407 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC14.01□□□□□ -0.17
TNFRSF6BO95407 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TNFRSF6BO95407 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TNFRSF6BO95407 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC14.01□□□□□ -0.17
TNFRSF6BO95407 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC14.01□□□□□ -0.17
TNFRSF6BO95407 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TNFRSF6BO95407 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC14.01□□□□□ -0.17
TNFRSF6BO95407 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TNFRSF6BO95407 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
TNFRSF6BO95407 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
TNFRSF6BO95407 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TNFRSF6BO95407 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
TNFRSF6BO95407 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TNFRSF6BO95407 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TNFRSF6BO95407 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TNFRSF6BO95407 RASA4CP-201ENST00000424092 1398 ntBASIC14.01□□□□□ -0.17
TNFRSF6BO95407 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
TNFRSF6BO95407 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TNFRSF6BO95407 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
TNFRSF6BO95407 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TNFRSF6BO95407 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC14.01□□□□□ -0.17
TNFRSF6BO95407 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
TNFRSF6BO95407 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TNFRSF6BO95407 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TNFRSF6BO95407 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC14.01□□□□□ -0.17
TNFRSF6BO95407 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC14.01□□□□□ -0.17
TNFRSF6BO95407 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms