Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
FOXN3O00409 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
FOXN3O00409 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
FOXN3O00409 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
FOXN3O00409 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC20.68■□□□□ 0.9
FOXN3O00409 SERF2-207ENST00000409614 582 ntTSL 2 BASIC20.68■□□□□ 0.9
FOXN3O00409 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
FOXN3O00409 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC20.68■□□□□ 0.9
FOXN3O00409 DENND3-207ENST00000518347 850 ntTSL 2 BASIC20.68■□□□□ 0.9
FOXN3O00409 LY6E-205ENST00000519611 635 ntTSL 3 BASIC20.68■□□□□ 0.9
FOXN3O00409 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
FOXN3O00409 CD99P1-205ENST00000527459 561 ntBASIC20.68■□□□□ 0.9
FOXN3O00409 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC20.68■□□□□ 0.9
FOXN3O00409 RN7SL471P-201ENST00000580476 299 ntBASIC20.68■□□□□ 0.9
FOXN3O00409 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC20.68■□□□□ 0.9
FOXN3O00409 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
FOXN3O00409 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC20.68■□□□□ 0.9
FOXN3O00409 AC073648.6-201ENST00000641589 218 ntBASIC20.68■□□□□ 0.9
FOXN3O00409 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
FOXN3O00409 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC20.68■□□□□ 0.9
FOXN3O00409 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC20.68■□□□□ 0.9
FOXN3O00409 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
FOXN3O00409 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
FOXN3O00409 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC20.68■□□□□ 0.9
FOXN3O00409 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
FOXN3O00409 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
FOXN3O00409 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC20.68■□□□□ 0.9
FOXN3O00409 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
FOXN3O00409 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
FOXN3O00409 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
FOXN3O00409 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
FOXN3O00409 AL020996.1-203ENST00000536896 2307 ntBASIC20.67■□□□□ 0.9
FOXN3O00409 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC20.67■□□□□ 0.9
FOXN3O00409 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
FOXN3O00409 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
FOXN3O00409 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC20.67■□□□□ 0.9
FOXN3O00409 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
FOXN3O00409 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
FOXN3O00409 KRASP1-201ENST00000407852 552 ntBASIC20.67■□□□□ 0.9
FOXN3O00409 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC20.67■□□□□ 0.9
FOXN3O00409 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC20.67■□□□□ 0.9
FOXN3O00409 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
FOXN3O00409 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC20.67■□□□□ 0.9
FOXN3O00409 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
FOXN3O00409 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
FOXN3O00409 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
FOXN3O00409 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
FOXN3O00409 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
FOXN3O00409 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC20.67■□□□□ 0.9
FOXN3O00409 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
FOXN3O00409 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
FOXN3O00409 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC20.67■□□□□ 0.9
FOXN3O00409 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
FOXN3O00409 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
FOXN3O00409 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
FOXN3O00409 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
FOXN3O00409 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
FOXN3O00409 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
FOXN3O00409 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
FOXN3O00409 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
FOXN3O00409 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC20.66■□□□□ 0.9
FOXN3O00409 C1QL1P1-201ENST00000568105 661 ntBASIC20.66■□□□□ 0.9
FOXN3O00409 AC006058.3-201ENST00000606217 1069 ntBASIC20.66■□□□□ 0.9
FOXN3O00409 AC004264.1-201ENST00000608354 794 ntBASIC20.66■□□□□ 0.9
FOXN3O00409 HLA-A-209ENST00000638375 975 ntBASIC20.66■□□□□ 0.9
FOXN3O00409 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
FOXN3O00409 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
FOXN3O00409 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
FOXN3O00409 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC20.66■□□□□ 0.9
FOXN3O00409 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
FOXN3O00409 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
FOXN3O00409 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
FOXN3O00409 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.65■□□□□ 0.9
FOXN3O00409 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
FOXN3O00409 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
FOXN3O00409 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
FOXN3O00409 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
FOXN3O00409 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC20.65■□□□□ 0.9
FOXN3O00409 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC20.65■□□□□ 0.9
FOXN3O00409 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
FOXN3O00409 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC20.65■□□□□ 0.9
FOXN3O00409 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC20.65■□□□□ 0.9
FOXN3O00409 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
FOXN3O00409 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC20.65■□□□□ 0.9
FOXN3O00409 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
FOXN3O00409 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
FOXN3O00409 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC20.65■□□□□ 0.9
FOXN3O00409 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC20.65■□□□□ 0.9
FOXN3O00409 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
FOXN3O00409 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
FOXN3O00409 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
FOXN3O00409 AC124016.1-201ENST00000609552 612 ntBASIC20.65■□□□□ 0.9
FOXN3O00409 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
FOXN3O00409 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
FOXN3O00409 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
FOXN3O00409 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC20.65■□□□□ 0.9
FOXN3O00409 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
FOXN3O00409 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
FOXN3O00409 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
FOXN3O00409 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC20.64■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms