Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 UBE2SP1-201ENST00000450587 669 ntBASIC23.17■■□□□ 1.3
DDX49Q9Y6V7 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC23.17■■□□□ 1.3
DDX49Q9Y6V7 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
DDX49Q9Y6V7 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
DDX49Q9Y6V7 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
DDX49Q9Y6V7 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC23.17■■□□□ 1.3
DDX49Q9Y6V7 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC23.17■■□□□ 1.3
DDX49Q9Y6V7 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
DDX49Q9Y6V7 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
DDX49Q9Y6V7 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
DDX49Q9Y6V7 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
DDX49Q9Y6V7 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
DDX49Q9Y6V7 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
DDX49Q9Y6V7 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
DDX49Q9Y6V7 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC23.16■■□□□ 1.3
DDX49Q9Y6V7 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC23.16■■□□□ 1.3
DDX49Q9Y6V7 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
DDX49Q9Y6V7 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
DDX49Q9Y6V7 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
DDX49Q9Y6V7 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
DDX49Q9Y6V7 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
DDX49Q9Y6V7 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
DDX49Q9Y6V7 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
DDX49Q9Y6V7 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC23.16■■□□□ 1.3
DDX49Q9Y6V7 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC23.16■■□□□ 1.3
DDX49Q9Y6V7 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
DDX49Q9Y6V7 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC23.16■■□□□ 1.3
DDX49Q9Y6V7 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC23.16■■□□□ 1.3
DDX49Q9Y6V7 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
DDX49Q9Y6V7 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC23.16■■□□□ 1.3
DDX49Q9Y6V7 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC23.16■■□□□ 1.3
DDX49Q9Y6V7 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
DDX49Q9Y6V7 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC23.16■■□□□ 1.3
DDX49Q9Y6V7 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
DDX49Q9Y6V7 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
DDX49Q9Y6V7 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
DDX49Q9Y6V7 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
DDX49Q9Y6V7 MOK-233ENST00000524214 1539 ntTSL 2 BASIC23.15■■□□□ 1.3
DDX49Q9Y6V7 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC23.15■■□□□ 1.3
DDX49Q9Y6V7 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
DDX49Q9Y6V7 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
DDX49Q9Y6V7 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
DDX49Q9Y6V7 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC23.15■■□□□ 1.3
DDX49Q9Y6V7 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
DDX49Q9Y6V7 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
DDX49Q9Y6V7 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC23.15■■□□□ 1.3
DDX49Q9Y6V7 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC23.15■■□□□ 1.3
DDX49Q9Y6V7 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC23.15■■□□□ 1.3
DDX49Q9Y6V7 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
DDX49Q9Y6V7 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC23.15■■□□□ 1.3
DDX49Q9Y6V7 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC23.15■■□□□ 1.3
DDX49Q9Y6V7 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
DDX49Q9Y6V7 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
DDX49Q9Y6V7 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
DDX49Q9Y6V7 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC23.15■■□□□ 1.3
DDX49Q9Y6V7 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
DDX49Q9Y6V7 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
DDX49Q9Y6V7 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
DDX49Q9Y6V7 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC23.15■■□□□ 1.3
DDX49Q9Y6V7 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
DDX49Q9Y6V7 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC23.14■■□□□ 1.3
DDX49Q9Y6V7 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC23.14■■□□□ 1.3
DDX49Q9Y6V7 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
DDX49Q9Y6V7 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
DDX49Q9Y6V7 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC23.14■■□□□ 1.3
DDX49Q9Y6V7 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
DDX49Q9Y6V7 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC23.14■■□□□ 1.29
DDX49Q9Y6V7 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.29
DDX49Q9Y6V7 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC23.14■■□□□ 1.29
DDX49Q9Y6V7 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC23.14■■□□□ 1.29
DDX49Q9Y6V7 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC23.14■■□□□ 1.29
DDX49Q9Y6V7 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
DDX49Q9Y6V7 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
DDX49Q9Y6V7 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC23.14■■□□□ 1.29
DDX49Q9Y6V7 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
DDX49Q9Y6V7 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
DDX49Q9Y6V7 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC23.14■■□□□ 1.29
DDX49Q9Y6V7 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC23.14■■□□□ 1.29
DDX49Q9Y6V7 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
DDX49Q9Y6V7 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC23.14■■□□□ 1.29
DDX49Q9Y6V7 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
DDX49Q9Y6V7 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
DDX49Q9Y6V7 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC23.13■■□□□ 1.29
DDX49Q9Y6V7 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
DDX49Q9Y6V7 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
DDX49Q9Y6V7 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC23.13■■□□□ 1.29
DDX49Q9Y6V7 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC23.13■■□□□ 1.29
DDX49Q9Y6V7 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
DDX49Q9Y6V7 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
DDX49Q9Y6V7 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
DDX49Q9Y6V7 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC23.13■■□□□ 1.29
DDX49Q9Y6V7 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
DDX49Q9Y6V7 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC23.13■■□□□ 1.29
DDX49Q9Y6V7 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC23.13■■□□□ 1.29
DDX49Q9Y6V7 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
DDX49Q9Y6V7 AL023875.1-201ENST00000640777 796 ntBASIC23.13■■□□□ 1.29
DDX49Q9Y6V7 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC23.13■■□□□ 1.29
DDX49Q9Y6V7 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
DDX49Q9Y6V7 AIRN-201ENST00000601203 4374 ntBASIC23.13■■□□□ 1.29
DDX49Q9Y6V7 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms