Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHGB3Q9Y5G1 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHGB3Q9Y5G1 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHGB3Q9Y5G1 GCSHP5-201ENST00000443090 522 ntBASIC18.33■□□□□ 0.52
PCDHGB3Q9Y5G1 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHGB3Q9Y5G1 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC18.33■□□□□ 0.52
PCDHGB3Q9Y5G1 UNC93B4-201ENST00000505679 747 ntBASIC18.33■□□□□ 0.52
PCDHGB3Q9Y5G1 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
PCDHGB3Q9Y5G1 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC18.33■□□□□ 0.52
PCDHGB3Q9Y5G1 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC18.33■□□□□ 0.52
PCDHGB3Q9Y5G1 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC18.33■□□□□ 0.52
PCDHGB3Q9Y5G1 MMD2-204ENST00000612910 778 ntTSL 5 BASIC18.33■□□□□ 0.52
PCDHGB3Q9Y5G1 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHGB3Q9Y5G1 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.33■□□□□ 0.52
PCDHGB3Q9Y5G1 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC18.33■□□□□ 0.52
PCDHGB3Q9Y5G1 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHGB3Q9Y5G1 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.33■□□□□ 0.52
PCDHGB3Q9Y5G1 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHGB3Q9Y5G1 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
PCDHGB3Q9Y5G1 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHGB3Q9Y5G1 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.33■□□□□ 0.52
PCDHGB3Q9Y5G1 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHGB3Q9Y5G1 AC018553.1-201ENST00000616682 1458 ntBASIC18.33■□□□□ 0.52
PCDHGB3Q9Y5G1 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.33■□□□□ 0.52
PCDHGB3Q9Y5G1 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGB3Q9Y5G1 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGB3Q9Y5G1 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
PCDHGB3Q9Y5G1 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
PCDHGB3Q9Y5G1 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGB3Q9Y5G1 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.32■□□□□ 0.52
PCDHGB3Q9Y5G1 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGB3Q9Y5G1 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
PCDHGB3Q9Y5G1 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGB3Q9Y5G1 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGB3Q9Y5G1 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
PCDHGB3Q9Y5G1 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGB3Q9Y5G1 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGB3Q9Y5G1 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGB3Q9Y5G1 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
PCDHGB3Q9Y5G1 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.32■□□□□ 0.52
PCDHGB3Q9Y5G1 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGB3Q9Y5G1 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.32■□□□□ 0.52
PCDHGB3Q9Y5G1 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.32■□□□□ 0.52
PCDHGB3Q9Y5G1 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGB3Q9Y5G1 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGB3Q9Y5G1 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC18.32■□□□□ 0.52
PCDHGB3Q9Y5G1 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC18.32■□□□□ 0.52
PCDHGB3Q9Y5G1 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.32■□□□□ 0.52
PCDHGB3Q9Y5G1 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC18.32■□□□□ 0.52
PCDHGB3Q9Y5G1 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGB3Q9Y5G1 AC008403.3-201ENST00000598924 454 ntBASIC18.32■□□□□ 0.52
PCDHGB3Q9Y5G1 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.32■□□□□ 0.52
PCDHGB3Q9Y5G1 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.32■□□□□ 0.52
PCDHGB3Q9Y5G1 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGB3Q9Y5G1 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
PCDHGB3Q9Y5G1 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.32■□□□□ 0.52
PCDHGB3Q9Y5G1 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGB3Q9Y5G1 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGB3Q9Y5G1 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.32■□□□□ 0.52
PCDHGB3Q9Y5G1 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.32■□□□□ 0.52
PCDHGB3Q9Y5G1 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGB3Q9Y5G1 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
PCDHGB3Q9Y5G1 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGB3Q9Y5G1 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGB3Q9Y5G1 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHGB3Q9Y5G1 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHGB3Q9Y5G1 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.31■□□□□ 0.52
PCDHGB3Q9Y5G1 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18.31■□□□□ 0.52
PCDHGB3Q9Y5G1 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHGB3Q9Y5G1 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHGB3Q9Y5G1 KRT17P3-201ENST00000420566 1262 ntBASIC18.31■□□□□ 0.52
PCDHGB3Q9Y5G1 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHGB3Q9Y5G1 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.31■□□□□ 0.52
PCDHGB3Q9Y5G1 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.31■□□□□ 0.52
PCDHGB3Q9Y5G1 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHGB3Q9Y5G1 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.31■□□□□ 0.52
PCDHGB3Q9Y5G1 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHGB3Q9Y5G1 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.31■□□□□ 0.52
PCDHGB3Q9Y5G1 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHGB3Q9Y5G1 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHGB3Q9Y5G1 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.31■□□□□ 0.52
PCDHGB3Q9Y5G1 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.31■□□□□ 0.52
PCDHGB3Q9Y5G1 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHGB3Q9Y5G1 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHGB3Q9Y5G1 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHGB3Q9Y5G1 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.31■□□□□ 0.52
PCDHGB3Q9Y5G1 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHGB3Q9Y5G1 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHGB3Q9Y5G1 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHGB3Q9Y5G1 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHGB3Q9Y5G1 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
PCDHGB3Q9Y5G1 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.3■□□□□ 0.52
PCDHGB3Q9Y5G1 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
PCDHGB3Q9Y5G1 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHGB3Q9Y5G1 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.3■□□□□ 0.52
PCDHGB3Q9Y5G1 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
PCDHGB3Q9Y5G1 LINC01465-201ENST00000408887 1940 ntBASIC18.3■□□□□ 0.52
PCDHGB3Q9Y5G1 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHGB3Q9Y5G1 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
PCDHGB3Q9Y5G1 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms