Protein–RNA interactions for Protein: Q9NRF8

CTPS2, CTP synthase 2, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS2Q9NRF8 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
CTPS2Q9NRF8 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC17.98■□□□□ 0.47
CTPS2Q9NRF8 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CTPS2Q9NRF8 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CTPS2Q9NRF8 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CTPS2Q9NRF8 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.98■□□□□ 0.47
CTPS2Q9NRF8 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
CTPS2Q9NRF8 HCG11-201ENST00000411553 5696 ntBASIC17.98■□□□□ 0.47
CTPS2Q9NRF8 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.98■□□□□ 0.47
CTPS2Q9NRF8 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CTPS2Q9NRF8 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CTPS2Q9NRF8 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.98■□□□□ 0.47
CTPS2Q9NRF8 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CTPS2Q9NRF8 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CTPS2Q9NRF8 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CTPS2Q9NRF8 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.97■□□□□ 0.47
CTPS2Q9NRF8 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CTPS2Q9NRF8 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
CTPS2Q9NRF8 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CTPS2Q9NRF8 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CTPS2Q9NRF8 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
CTPS2Q9NRF8 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CTPS2Q9NRF8 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CTPS2Q9NRF8 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
CTPS2Q9NRF8 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.97■□□□□ 0.47
CTPS2Q9NRF8 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.97■□□□□ 0.47
CTPS2Q9NRF8 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC17.97■□□□□ 0.47
CTPS2Q9NRF8 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC17.97■□□□□ 0.47
CTPS2Q9NRF8 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC17.97■□□□□ 0.47
CTPS2Q9NRF8 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CTPS2Q9NRF8 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC17.97■□□□□ 0.47
CTPS2Q9NRF8 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CTPS2Q9NRF8 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
CTPS2Q9NRF8 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC17.97■□□□□ 0.47
CTPS2Q9NRF8 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC17.97■□□□□ 0.47
CTPS2Q9NRF8 SOX15-203ENST00000570788 1093 ntBASIC17.97■□□□□ 0.47
CTPS2Q9NRF8 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CTPS2Q9NRF8 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CTPS2Q9NRF8 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CTPS2Q9NRF8 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CTPS2Q9NRF8 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CTPS2Q9NRF8 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CTPS2Q9NRF8 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.96■□□□□ 0.47
CTPS2Q9NRF8 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CTPS2Q9NRF8 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CTPS2Q9NRF8 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CTPS2Q9NRF8 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CTPS2Q9NRF8 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CTPS2Q9NRF8 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
CTPS2Q9NRF8 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.96■□□□□ 0.47
CTPS2Q9NRF8 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
CTPS2Q9NRF8 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CTPS2Q9NRF8 RNA5SP413-201ENST00000516373 109 ntBASIC17.96■□□□□ 0.47
CTPS2Q9NRF8 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC17.96■□□□□ 0.47
CTPS2Q9NRF8 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
CTPS2Q9NRF8 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC17.96■□□□□ 0.47
CTPS2Q9NRF8 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CTPS2Q9NRF8 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC17.96■□□□□ 0.47
CTPS2Q9NRF8 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.96■□□□□ 0.47
CTPS2Q9NRF8 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.96■□□□□ 0.47
CTPS2Q9NRF8 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CTPS2Q9NRF8 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CTPS2Q9NRF8 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.96■□□□□ 0.46
CTPS2Q9NRF8 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC17.96■□□□□ 0.46
CTPS2Q9NRF8 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CTPS2Q9NRF8 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CTPS2Q9NRF8 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CTPS2Q9NRF8 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CTPS2Q9NRF8 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CTPS2Q9NRF8 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CTPS2Q9NRF8 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC17.95■□□□□ 0.46
CTPS2Q9NRF8 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CTPS2Q9NRF8 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CTPS2Q9NRF8 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.95■□□□□ 0.46
CTPS2Q9NRF8 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
CTPS2Q9NRF8 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CTPS2Q9NRF8 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CTPS2Q9NRF8 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CTPS2Q9NRF8 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CTPS2Q9NRF8 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC17.95■□□□□ 0.46
CTPS2Q9NRF8 RPS2P52-201ENST00000469610 820 ntBASIC17.95■□□□□ 0.46
CTPS2Q9NRF8 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC17.95■□□□□ 0.46
CTPS2Q9NRF8 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC17.95■□□□□ 0.46
CTPS2Q9NRF8 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC17.95■□□□□ 0.46
CTPS2Q9NRF8 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CTPS2Q9NRF8 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC17.95■□□□□ 0.46
CTPS2Q9NRF8 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CTPS2Q9NRF8 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
CTPS2Q9NRF8 AC093503.3-201ENST00000624917 2352 ntBASIC17.95■□□□□ 0.46
CTPS2Q9NRF8 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CTPS2Q9NRF8 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
CTPS2Q9NRF8 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC17.95■□□□□ 0.46
CTPS2Q9NRF8 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CTPS2Q9NRF8 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC17.94■□□□□ 0.46
CTPS2Q9NRF8 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CTPS2Q9NRF8 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CTPS2Q9NRF8 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
CTPS2Q9NRF8 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CTPS2Q9NRF8 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC17.94■□□□□ 0.46
CTPS2Q9NRF8 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms