Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 MDFI-202ENST00000373050 809 ntTSL 2 BASIC17.92■□□□□ 0.46
UBQLN3Q9H347 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
UBQLN3Q9H347 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17.92■□□□□ 0.46
UBQLN3Q9H347 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC17.92■□□□□ 0.46
UBQLN3Q9H347 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
UBQLN3Q9H347 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC17.92■□□□□ 0.46
UBQLN3Q9H347 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.92■□□□□ 0.46
UBQLN3Q9H347 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
UBQLN3Q9H347 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.92■□□□□ 0.46
UBQLN3Q9H347 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.92■□□□□ 0.46
UBQLN3Q9H347 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
UBQLN3Q9H347 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.92■□□□□ 0.46
UBQLN3Q9H347 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
UBQLN3Q9H347 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
UBQLN3Q9H347 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC17.92■□□□□ 0.46
UBQLN3Q9H347 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
UBQLN3Q9H347 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
UBQLN3Q9H347 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
UBQLN3Q9H347 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
UBQLN3Q9H347 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
UBQLN3Q9H347 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
UBQLN3Q9H347 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
UBQLN3Q9H347 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.91■□□□□ 0.46
UBQLN3Q9H347 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
UBQLN3Q9H347 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC17.91■□□□□ 0.46
UBQLN3Q9H347 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
UBQLN3Q9H347 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
UBQLN3Q9H347 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
UBQLN3Q9H347 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
UBQLN3Q9H347 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
UBQLN3Q9H347 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
UBQLN3Q9H347 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.91■□□□□ 0.46
UBQLN3Q9H347 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
UBQLN3Q9H347 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
UBQLN3Q9H347 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
UBQLN3Q9H347 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
UBQLN3Q9H347 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
UBQLN3Q9H347 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
UBQLN3Q9H347 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
UBQLN3Q9H347 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
UBQLN3Q9H347 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
UBQLN3Q9H347 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC17.91■□□□□ 0.46
UBQLN3Q9H347 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
UBQLN3Q9H347 AC004264.1-201ENST00000608354 794 ntBASIC17.91■□□□□ 0.46
UBQLN3Q9H347 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
UBQLN3Q9H347 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
UBQLN3Q9H347 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
UBQLN3Q9H347 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.91■□□□□ 0.46
UBQLN3Q9H347 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.91■□□□□ 0.46
UBQLN3Q9H347 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
UBQLN3Q9H347 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
UBQLN3Q9H347 TNXA-203ENST00000507684 2038 ntBASIC17.91■□□□□ 0.46
UBQLN3Q9H347 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
UBQLN3Q9H347 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC17.91■□□□□ 0.46
UBQLN3Q9H347 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
UBQLN3Q9H347 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
UBQLN3Q9H347 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
UBQLN3Q9H347 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
UBQLN3Q9H347 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
UBQLN3Q9H347 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
UBQLN3Q9H347 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
UBQLN3Q9H347 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
UBQLN3Q9H347 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
UBQLN3Q9H347 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
UBQLN3Q9H347 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC17.9■□□□□ 0.46
UBQLN3Q9H347 AP006587.1-201ENST00000534129 1502 ntBASIC17.9■□□□□ 0.46
UBQLN3Q9H347 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
UBQLN3Q9H347 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
UBQLN3Q9H347 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC17.9■□□□□ 0.46
UBQLN3Q9H347 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC17.9■□□□□ 0.46
UBQLN3Q9H347 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
UBQLN3Q9H347 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC17.9■□□□□ 0.46
UBQLN3Q9H347 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
UBQLN3Q9H347 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC17.9■□□□□ 0.46
UBQLN3Q9H347 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC17.9■□□□□ 0.46
UBQLN3Q9H347 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC17.9■□□□□ 0.46
UBQLN3Q9H347 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
UBQLN3Q9H347 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC17.9■□□□□ 0.46
UBQLN3Q9H347 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
UBQLN3Q9H347 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
UBQLN3Q9H347 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
UBQLN3Q9H347 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.9■□□□□ 0.46
UBQLN3Q9H347 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
UBQLN3Q9H347 AP001271.2-201ENST00000624018 1556 ntBASIC17.9■□□□□ 0.46
UBQLN3Q9H347 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
UBQLN3Q9H347 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
UBQLN3Q9H347 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
UBQLN3Q9H347 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
UBQLN3Q9H347 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
UBQLN3Q9H347 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC17.9■□□□□ 0.46
UBQLN3Q9H347 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.9■□□□□ 0.46
UBQLN3Q9H347 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC17.9■□□□□ 0.46
UBQLN3Q9H347 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
UBQLN3Q9H347 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.46
UBQLN3Q9H347 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
UBQLN3Q9H347 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.46
UBQLN3Q9H347 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
UBQLN3Q9H347 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
UBQLN3Q9H347 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
UBQLN3Q9H347 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms