Protein–RNA interactions for Protein: Q9H1C7

CYSTM1, Cysteine-rich and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1Q9H1C7 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
CYSTM1Q9H1C7 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
CYSTM1Q9H1C7 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
CYSTM1Q9H1C7 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
CYSTM1Q9H1C7 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
CYSTM1Q9H1C7 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC11.27□□□□□ -0.6
CYSTM1Q9H1C7 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.6
CYSTM1Q9H1C7 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CYSTM1Q9H1C7 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
CYSTM1Q9H1C7 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
CYSTM1Q9H1C7 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
CYSTM1Q9H1C7 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC11.27□□□□□ -0.61
CYSTM1Q9H1C7 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.61
CYSTM1Q9H1C7 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC11.27□□□□□ -0.61
CYSTM1Q9H1C7 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CYSTM1Q9H1C7 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CYSTM1Q9H1C7 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC11.27□□□□□ -0.61
CYSTM1Q9H1C7 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
CYSTM1Q9H1C7 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
CYSTM1Q9H1C7 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
CYSTM1Q9H1C7 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC11.27□□□□□ -0.61
CYSTM1Q9H1C7 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CYSTM1Q9H1C7 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CYSTM1Q9H1C7 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
CYSTM1Q9H1C7 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
CYSTM1Q9H1C7 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
CYSTM1Q9H1C7 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC11.27□□□□□ -0.61
CYSTM1Q9H1C7 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
CYSTM1Q9H1C7 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC11.27□□□□□ -0.61
CYSTM1Q9H1C7 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CYSTM1Q9H1C7 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC11.26□□□□□ -0.61
CYSTM1Q9H1C7 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
CYSTM1Q9H1C7 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
CYSTM1Q9H1C7 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC11.26□□□□□ -0.61
CYSTM1Q9H1C7 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC11.26□□□□□ -0.61
CYSTM1Q9H1C7 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CYSTM1Q9H1C7 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
CYSTM1Q9H1C7 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CYSTM1Q9H1C7 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CYSTM1Q9H1C7 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
CYSTM1Q9H1C7 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CYSTM1Q9H1C7 AIRN-201ENST00000601203 4374 ntBASIC11.26□□□□□ -0.61
CYSTM1Q9H1C7 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
CYSTM1Q9H1C7 MIR6090-201ENST00000622481 60 ntBASIC11.26□□□□□ -0.61
CYSTM1Q9H1C7 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC11.26□□□□□ -0.61
CYSTM1Q9H1C7 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CYSTM1Q9H1C7 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC11.26□□□□□ -0.61
CYSTM1Q9H1C7 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CYSTM1Q9H1C7 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CYSTM1Q9H1C7 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CYSTM1Q9H1C7 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC11.26□□□□□ -0.61
CYSTM1Q9H1C7 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC11.26□□□□□ -0.61
CYSTM1Q9H1C7 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CYSTM1Q9H1C7 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CYSTM1Q9H1C7 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC11.26□□□□□ -0.61
CYSTM1Q9H1C7 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC11.26□□□□□ -0.61
CYSTM1Q9H1C7 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
CYSTM1Q9H1C7 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CYSTM1Q9H1C7 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC11.26□□□□□ -0.61
CYSTM1Q9H1C7 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC11.26□□□□□ -0.61
CYSTM1Q9H1C7 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
CYSTM1Q9H1C7 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC11.26□□□□□ -0.61
CYSTM1Q9H1C7 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CYSTM1Q9H1C7 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC11.26□□□□□ -0.61
CYSTM1Q9H1C7 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
CYSTM1Q9H1C7 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC11.25□□□□□ -0.61
CYSTM1Q9H1C7 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC11.25□□□□□ -0.61
CYSTM1Q9H1C7 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC11.25□□□□□ -0.61
CYSTM1Q9H1C7 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC11.25□□□□□ -0.61
CYSTM1Q9H1C7 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC11.25□□□□□ -0.61
CYSTM1Q9H1C7 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC11.25□□□□□ -0.61
CYSTM1Q9H1C7 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
CYSTM1Q9H1C7 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC11.25□□□□□ -0.61
CYSTM1Q9H1C7 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
CYSTM1Q9H1C7 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
CYSTM1Q9H1C7 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC11.25□□□□□ -0.61
CYSTM1Q9H1C7 AC093525.10-201ENST00000625130 1569 ntBASIC11.25□□□□□ -0.61
CYSTM1Q9H1C7 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
CYSTM1Q9H1C7 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
CYSTM1Q9H1C7 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
CYSTM1Q9H1C7 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
CYSTM1Q9H1C7 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC11.25□□□□□ -0.61
CYSTM1Q9H1C7 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC11.25□□□□□ -0.61
CYSTM1Q9H1C7 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
CYSTM1Q9H1C7 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC11.25□□□□□ -0.61
CYSTM1Q9H1C7 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
CYSTM1Q9H1C7 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
CYSTM1Q9H1C7 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
CYSTM1Q9H1C7 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC11.25□□□□□ -0.61
CYSTM1Q9H1C7 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
CYSTM1Q9H1C7 GNE-204ENST00000539208 2190 ntTSL 2 BASIC11.25□□□□□ -0.61
CYSTM1Q9H1C7 AP001094.4-201ENST00000579008 2176 ntBASIC11.25□□□□□ -0.61
CYSTM1Q9H1C7 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
CYSTM1Q9H1C7 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
CYSTM1Q9H1C7 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC11.25□□□□□ -0.61
CYSTM1Q9H1C7 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
CYSTM1Q9H1C7 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
CYSTM1Q9H1C7 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
CYSTM1Q9H1C7 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
CYSTM1Q9H1C7 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms