Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
DDX47Q9H0S4 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC20.15■□□□□ 0.82
DDX47Q9H0S4 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC20.15■□□□□ 0.82
DDX47Q9H0S4 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
DDX47Q9H0S4 CALM3-202ENST00000391918 702 ntTSL 2 BASIC20.15■□□□□ 0.82
DDX47Q9H0S4 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC20.15■□□□□ 0.82
DDX47Q9H0S4 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20.15■□□□□ 0.82
DDX47Q9H0S4 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.15■□□□□ 0.82
DDX47Q9H0S4 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.15■□□□□ 0.82
DDX47Q9H0S4 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
DDX47Q9H0S4 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
DDX47Q9H0S4 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
DDX47Q9H0S4 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
DDX47Q9H0S4 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC20.15■□□□□ 0.82
DDX47Q9H0S4 AL031598.1-201ENST00000561511 1773 ntBASIC20.15■□□□□ 0.82
DDX47Q9H0S4 USP39-202ENST00000409025 1946 ntTSL 5 BASIC20.15■□□□□ 0.82
DDX47Q9H0S4 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
DDX47Q9H0S4 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC20.15■□□□□ 0.82
DDX47Q9H0S4 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
DDX47Q9H0S4 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
DDX47Q9H0S4 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
DDX47Q9H0S4 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
DDX47Q9H0S4 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
DDX47Q9H0S4 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
DDX47Q9H0S4 COMP-202ENST00000425807 2292 ntTSL 2 BASIC20.14■□□□□ 0.81
DDX47Q9H0S4 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
DDX47Q9H0S4 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
DDX47Q9H0S4 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC20.14■□□□□ 0.81
DDX47Q9H0S4 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC20.14■□□□□ 0.81
DDX47Q9H0S4 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC20.14■□□□□ 0.81
DDX47Q9H0S4 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
DDX47Q9H0S4 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
DDX47Q9H0S4 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.14■□□□□ 0.81
DDX47Q9H0S4 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.14■□□□□ 0.81
DDX47Q9H0S4 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
DDX47Q9H0S4 GPX1P1-201ENST00000388829 606 ntBASIC20.14■□□□□ 0.81
DDX47Q9H0S4 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
DDX47Q9H0S4 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
DDX47Q9H0S4 AC006015.1-201ENST00000429970 570 ntBASIC20.14■□□□□ 0.81
DDX47Q9H0S4 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
DDX47Q9H0S4 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC20.14■□□□□ 0.81
DDX47Q9H0S4 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC20.14■□□□□ 0.81
DDX47Q9H0S4 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.14■□□□□ 0.81
DDX47Q9H0S4 MIR6821-201ENST00000617625 74 ntBASIC20.14■□□□□ 0.81
DDX47Q9H0S4 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.14■□□□□ 0.81
DDX47Q9H0S4 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
DDX47Q9H0S4 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC20.14■□□□□ 0.81
DDX47Q9H0S4 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
DDX47Q9H0S4 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
DDX47Q9H0S4 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
DDX47Q9H0S4 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
DDX47Q9H0S4 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
DDX47Q9H0S4 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
DDX47Q9H0S4 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
DDX47Q9H0S4 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC20.13■□□□□ 0.81
DDX47Q9H0S4 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
DDX47Q9H0S4 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
DDX47Q9H0S4 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
DDX47Q9H0S4 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
DDX47Q9H0S4 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
DDX47Q9H0S4 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC20.13■□□□□ 0.81
DDX47Q9H0S4 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC20.13■□□□□ 0.81
DDX47Q9H0S4 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
DDX47Q9H0S4 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
DDX47Q9H0S4 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC20.13■□□□□ 0.81
DDX47Q9H0S4 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
DDX47Q9H0S4 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
DDX47Q9H0S4 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
DDX47Q9H0S4 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
DDX47Q9H0S4 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
DDX47Q9H0S4 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC20.13■□□□□ 0.81
DDX47Q9H0S4 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
DDX47Q9H0S4 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
DDX47Q9H0S4 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
DDX47Q9H0S4 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
DDX47Q9H0S4 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
DDX47Q9H0S4 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC20.13■□□□□ 0.81
DDX47Q9H0S4 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
DDX47Q9H0S4 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
DDX47Q9H0S4 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
DDX47Q9H0S4 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
DDX47Q9H0S4 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
DDX47Q9H0S4 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC20.12■□□□□ 0.81
DDX47Q9H0S4 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
DDX47Q9H0S4 SDHAP1-207ENST00000440850 2000 ntBASIC20.12■□□□□ 0.81
DDX47Q9H0S4 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.12■□□□□ 0.81
DDX47Q9H0S4 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
DDX47Q9H0S4 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
DDX47Q9H0S4 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
DDX47Q9H0S4 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
DDX47Q9H0S4 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC20.12■□□□□ 0.81
DDX47Q9H0S4 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
DDX47Q9H0S4 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.12■□□□□ 0.81
DDX47Q9H0S4 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
DDX47Q9H0S4 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
DDX47Q9H0S4 AC007322.1-201ENST00000426983 750 ntBASIC20.12■□□□□ 0.81
DDX47Q9H0S4 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.12■□□□□ 0.81
DDX47Q9H0S4 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC20.12■□□□□ 0.81
DDX47Q9H0S4 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC20.12■□□□□ 0.81
DDX47Q9H0S4 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms