Protein–RNA interactions for Protein: Q9H0L4

CSTF2T, Cleavage stimulation factor subunit 2 tau variant, humanhuman

Known RBP eCLIP

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2TQ9H0L4 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.098e-7■■■□□ 18.9
CSTF2TQ9H0L4 CTBP2-208ENST00000476817 705 ntTSL 319.66■□□□□ 0.748e-7■■■□□ 18.9
CSTF2TQ9H0L4 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.428e-7■■■□□ 18.9
CSTF2TQ9H0L4 CTBP2-203ENST00000337195 6939 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.78e-7■■■□□ 18.9
CSTF2TQ9H0L4 CTBP2-212ENST00000530884 578 ntTSL 310.06□□□□□ -0.88e-7■■■□□ 18.9
CSTF2TQ9H0L4 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.612e-10■■■□□ 18.9
CSTF2TQ9H0L4 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.512e-10■■■□□ 18.9
CSTF2TQ9H0L4 LDLRAD4-215ENST00000590371 598 ntTSL 217.24■□□□□ 0.353e-15■■■□□ 18.9
CSTF2TQ9H0L4 AL589666.1-201ENST00000503906 835 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.532e-10■■■□□ 18.9
CSTF2TQ9H0L4 AC074091.1-201ENST00000505973 1741 ntTSL 2 BASIC10.83□□□□□ -0.682e-10■■■□□ 18.9
CSTF2TQ9H0L4 ZNF512-204ENST00000416005 3515 ntTSL 2 BASIC8.83□□□□□ -12e-10■■■□□ 18.9
CSTF2TQ9H0L4 ZNF512-202ENST00000379717 3417 ntAPPRIS ALT1 TSL 5 BASIC8.01□□□□□ -1.132e-10■■■□□ 18.9
CSTF2TQ9H0L4 ZNF512-201ENST00000355467 3541 ntAPPRIS P2 TSL 2 BASIC7.84□□□□□ -1.152e-10■■■□□ 18.9
CSTF2TQ9H0L4 ZNF512-208ENST00000556601 3543 ntTSL 1 (best) BASIC7.57□□□□□ -1.22e-10■■■□□ 18.9
CSTF2TQ9H0L4 ZNF512-203ENST00000413371 3703 ntTSL 2 BASIC7.51□□□□□ -1.212e-10■■■□□ 18.9
CSTF2TQ9H0L4 ZNF512-206ENST00000488055 2465 ntTSL 26.21□□□□□ -1.412e-10■■■□□ 18.9
CSTF2TQ9H0L4 SLC16A3-209ENST00000580098 859 ntTSL 218.43■□□□□ 0.541e-12■■■□□ 18.9
CSTF2TQ9H0L4 ZFHX2-AS1-202ENST00000554403 2524 ntTSL 214.88□□□□□ -0.036e-7■■■□□ 18.9
CSTF2TQ9H0L4 ZFHX2-AS1-201ENST00000553985 2322 ntTSL 2 BASIC11.81□□□□□ -0.526e-7■■■□□ 18.9
CSTF2TQ9H0L4 RNF126-204ENST00000590885 1436 ntTSL 517.16■□□□□ 0.347e-8■■■□□ 18.9
CSTF2TQ9H0L4 ZFHX2-AS1-203ENST00000556354 931 ntTSL 3 BASIC9.75□□□□□ -0.857e-7■■■□□ 18.9
CSTF2TQ9H0L4 SH3TC1-210ENST00000506360 5829 ntTSL 215.66■□□□□ 0.19e-7■■■□□ 18.9
CSTF2TQ9H0L4 SH3TC1-206ENST00000502669 3484 ntTSL 1 (best)13.63□□□□□ -0.239e-7■■■□□ 18.9
CSTF2TQ9H0L4 SH3TC1-225ENST00000515682 4293 ntTSL 212.78□□□□□ -0.369e-7■■■□□ 18.9
CSTF2TQ9H0L4 SH3TC1-201ENST00000245105 4226 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.419e-7■■■□□ 18.9
CSTF2TQ9H0L4 LARP4B-202ENST00000406525 681 ntTSL 525.31■■□□□ 1.648e-11■■■□□ 18.9
CSTF2TQ9H0L4 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.148e-11■■■□□ 18.9
CSTF2TQ9H0L4 PDCD6-204ENST00000506909 458 ntTSL 312.64□□□□□ -0.391e-6■■■□□ 18.9
CSTF2TQ9H0L4 BSG-211ENST00000576984 544 ntTSL 417.36■□□□□ 0.374e-7■■■□□ 18.9
CSTF2TQ9H0L4 VOPP1-214ENST00000462326 536 ntTSL 417.36■□□□□ 0.376e-7■■■□□ 18.9
CSTF2TQ9H0L4 CCDC57-214ENST00000582040 330 ntTSL 313.64□□□□□ -0.231e-7■■■□□ 18.9
CSTF2TQ9H0L4 MICALL2-202ENST00000413446 3046 ntTSL 212.86□□□□□ -0.351e-7■■■□□ 18.9
CSTF2TQ9H0L4 PKM-204ENST00000449901 2526 ntTSL 2 BASIC22.53■■□□□ 1.22e-7■■■□□ 18.9
CSTF2TQ9H0L4 PKM-203ENST00000389093 2279 ntTSL 5 BASIC22.23■■□□□ 1.152e-7■■■□□ 18.9
CSTF2TQ9H0L4 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.15■□□□□ 0.822e-7■■■□□ 18.9
CSTF2TQ9H0L4 PKM-217ENST00000566809 560 ntTSL 418.72■□□□□ 0.592e-7■■■□□ 18.9
CSTF2TQ9H0L4 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.17■□□□□ 0.52e-7■■■□□ 18.9
CSTF2TQ9H0L4 PKM-218ENST00000567087 550 ntTSL 417.44■□□□□ 0.382e-7■■■□□ 18.9
CSTF2TQ9H0L4 PKM-223ENST00000569050 457 ntTSL 416.2■□□□□ 0.182e-7■■■□□ 18.9
CSTF2TQ9H0L4 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.012e-7■■■□□ 18.9
CSTF2TQ9H0L4 PKM-222ENST00000568883 1863 ntTSL 5 BASIC11.73□□□□□ -0.532e-7■■■□□ 18.9
CSTF2TQ9H0L4 PKM-224ENST00000569857 1355 ntTSL 511.52□□□□□ -0.572e-7■■■□□ 18.9
CSTF2TQ9H0L4 PKM-202ENST00000335181 2318 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.582e-7■■■□□ 18.9
CSTF2TQ9H0L4 PKM-219ENST00000567118 2254 ntTSL 210.2□□□□□ -0.782e-7■■■□□ 18.9
CSTF2TQ9H0L4 PKM-211ENST00000564276 753 ntTSL 1 (best)8.44□□□□□ -1.062e-7■■■□□ 18.9
CSTF2TQ9H0L4 GNB1-202ENST00000434686 684 ntTSL 39.87□□□□□ -0.838e-9■■■□□ 18.9
CSTF2TQ9H0L4 AL136115.2-201ENST00000602889 587 ntTSL 5 BASIC10.97□□□□□ -0.654e-7■■■□□ 18.9
CSTF2TQ9H0L4 E4F1-202ENST00000562589 817 ntTSL 523.44■■□□□ 1.341e-7■■■□□ 18.9
CSTF2TQ9H0L4 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.35■□□□□ 0.691e-7■■■□□ 18.9
CSTF2TQ9H0L4 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.631e-7■■■□□ 18.9
CSTF2TQ9H0L4 E4F1-207ENST00000565413 940 ntTSL 318.82■□□□□ 0.61e-7■■■□□ 18.9
CSTF2TQ9H0L4 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.57■□□□□ 0.561e-7■■■□□ 18.9
CSTF2TQ9H0L4 E4F1-209ENST00000569796 5931 ntTSL 216.44■□□□□ 0.221e-7■■■□□ 18.9
CSTF2TQ9H0L4 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.032e-6■■■□□ 18.9
CSTF2TQ9H0L4 HCFC1-202ENST00000369984 8375 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.492e-6■■■□□ 18.9
CSTF2TQ9H0L4 ASPSCR1-213ENST00000582355 1246 ntTSL 522.14■■□□□ 1.133e-21■■■□□ 18.8
CSTF2TQ9H0L4 ASPSCR1-219ENST00000584454 1919 ntTSL 1 (best)20.18■□□□□ 0.823e-21■■■□□ 18.8
CSTF2TQ9H0L4 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.06■□□□□ 0.83e-21■■■□□ 18.8
CSTF2TQ9H0L4 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.783e-21■■■□□ 18.8
CSTF2TQ9H0L4 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.713e-21■■■□□ 18.8
CSTF2TQ9H0L4 DCDC2-202ENST00000378454 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.413e-6■■■□□ 18.8
CSTF2TQ9H0L4 GNB1-204ENST00000439272 602 ntTSL 58.89□□□□□ -0.995e-9■■■□□ 18.8
CSTF2TQ9H0L4 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.55■□□□□ 0.249e-7■■■□□ 18.8
CSTF2TQ9H0L4 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.089e-7■■■□□ 18.8
CSTF2TQ9H0L4 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.049e-7■■■□□ 18.8
CSTF2TQ9H0L4 KDM5B-206ENST00000470573 535 ntTSL 46.69□□□□□ -1.341e-6■■■□□ 18.8
CSTF2TQ9H0L4 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.233e-6■■■□□ 18.8
CSTF2TQ9H0L4 POLR2E-204ENST00000586746 1096 ntAPPRIS P1 TSL 3 BASIC11.96□□□□□ -0.493e-6■■■□□ 18.8
CSTF2TQ9H0L4 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.09■□□□□ 0.495e-7■■■□□ 18.8
CSTF2TQ9H0L4 IKZF1-213ENST00000471793 1779 ntTSL 217.17■□□□□ 0.345e-7■■■□□ 18.8
CSTF2TQ9H0L4 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC13.88□□□□□ -0.195e-7■■■□□ 18.8
CSTF2TQ9H0L4 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC13.85□□□□□ -0.195e-7■■■□□ 18.8
CSTF2TQ9H0L4 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC13.68□□□□□ -0.225e-7■■■□□ 18.8
CSTF2TQ9H0L4 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC13.45□□□□□ -0.265e-7■■■□□ 18.8
CSTF2TQ9H0L4 IKZF1-203ENST00000346667 5376 ntTSL 5 BASIC13.2□□□□□ -0.35e-7■■■□□ 18.8
CSTF2TQ9H0L4 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC13.18□□□□□ -0.35e-7■■■□□ 18.8
CSTF2TQ9H0L4 IKZF1-211ENST00000440768 5511 ntTSL 5 BASIC12.64□□□□□ -0.395e-7■■■□□ 18.8
CSTF2TQ9H0L4 IKZF1-206ENST00000359197 3487 ntTSL 1 (best) BASIC12.06□□□□□ -0.485e-7■■■□□ 18.8
CSTF2TQ9H0L4 IKZF1-201ENST00000331340 6189 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.625e-7■■■□□ 18.8
CSTF2TQ9H0L4 IKZF1-210ENST00000439701 3572 ntTSL 1 (best) BASIC11.15□□□□□ -0.635e-7■■■□□ 18.8
CSTF2TQ9H0L4 IKZF1-212ENST00000462201 1122 ntTSL 37.98□□□□□ -1.135e-7■■■□□ 18.8
CSTF2TQ9H0L4 IKZF1-216ENST00000492782 711 ntTSL 26.21□□□□□ -1.425e-7■■■□□ 18.8
CSTF2TQ9H0L4 IKZF1-208ENST00000426121 201 ntTSL 1 (best)5.51□□□□□ -1.535e-7■■■□□ 18.8
CSTF2TQ9H0L4 THRB-210ENST00000447414 575 ntTSL 417.79■□□□□ 0.441e-8■■■□□ 18.8
CSTF2TQ9H0L4 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.469e-7■■■□□ 18.8
CSTF2TQ9H0L4 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.098e-8■■■□□ 18.8
CSTF2TQ9H0L4 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.088e-8■■■□□ 18.8
CSTF2TQ9H0L4 RABL6-210ENST00000484471 2746 ntTSL 518.99■□□□□ 0.638e-8■■■□□ 18.8
CSTF2TQ9H0L4 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.328e-8■■■□□ 18.8
CSTF2TQ9H0L4 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.168e-8■■■□□ 18.8
CSTF2TQ9H0L4 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.25e-7■■■□□ 18.8
CSTF2TQ9H0L4 CUL1-203ENST00000602748 3054 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.745e-7■■■□□ 18.8
CSTF2TQ9H0L4 CUL1-202ENST00000409469 2857 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.015e-7■■■□□ 18.8
CSTF2TQ9H0L4 CDK4-214ENST00000552862 447 ntTSL 311.93□□□□□ -0.53e-6■■■□□ 18.8
CSTF2TQ9H0L4 MACROD1-206ENST00000542359 459 ntTSL 314.67□□□□□ -0.065e-7■■■□□ 18.8
CSTF2TQ9H0L4 DOT1L-203ENST00000452696 624 ntTSL 313.94□□□□□ -0.184e-7■■■□□ 18.8
CSTF2TQ9H0L4 CLUH-213ENST00000576309 433 ntTSL 315.97■□□□□ 0.157e-7■■■□□ 18.8
CSTF2TQ9H0L4 ARVCF-209ENST00000487793 863 ntTSL 216.52■□□□□ 0.246e-7■■■□□ 18.8
CSTF2TQ9H0L4 AMDHD2-212ENST00000566706 940 ntTSL 520.96■□□□□ 0.955e-8■■■□□ 18.8
CSTF2TQ9H0L4 AMDHD2-211ENST00000565963 844 ntTSL 519.56■□□□□ 0.725e-8■■■□□ 18.8
Retrieved 100 of 19,151 protein–RNA pairs in 201.1 ms