RNA–Protein interactions for RNA: ENST00000515682.5

SH3TC1-225, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 2

Gene SH3TC1, Length 4,293 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-225ENST00000515682 NISCHQ9Y2I1 1504 aa24.96■■□□□ 1.59
SH3TC1-225ENST00000515682 DCAF8L2P0C7V8 631 aa23.77■■□□□ 1.4
SH3TC1-225ENST00000515682 SUPT5HO00267 1087 aaKnown RBP22.97■■□□□ 1.27
SH3TC1-225ENST00000515682 SHROOM4Q9ULL8 1493 aa22.87■■□□□ 1.25
SH3TC1-225ENST00000515682 PCGF6Q9BYE7 350 aa22.36■■□□□ 1.17
SH3TC1-225ENST00000515682 HRCP23327 699 aa22.11■■□□□ 1.13
SH3TC1-225ENST00000515682 PPARGC1BQ86YN6 1023 aaKnown RBP21.92■■□□□ 1.1
SH3TC1-225ENST00000515682 EHMT2Q96KQ7 1210 aa21.74■■□□□ 1.07
SH3TC1-225ENST00000515682 CHIC1Q5VXU3 224 aa21.69■■□□□ 1.06
SH3TC1-225ENST00000515682 LOC105371045A0A1W2PR82 267 aa21.52■■□□□ 1.04
SH3TC1-225ENST00000515682 FAM9AQ8IZU1 332 aaPredicted RBP21.46■■□□□ 1.03
SH3TC1-225ENST00000515682 PELP1Q8IZL8 1130 aaKnown RBP21.41■■□□□ 1.02
SH3TC1-225ENST00000515682 ABCC9O60706 1549 aa21.35■■□□□ 1.01
SH3TC1-225ENST00000515682 TRIM26Q12899 539 aaPredicted RBP21.34■■□□□ 1.01
SH3TC1-225ENST00000515682 ZEB1P37275 1124 aaPredicted RBP21.28■■□□□ 1
SH3TC1-225ENST00000515682 MYO15BQ96JP2 1530 aa21.16■□□□□ 0.98
SH3TC1-225ENST00000515682 TTBK1Q5TCY1 1321 aaPredicted RBP21.12■□□□□ 0.97
SH3TC1-225ENST00000515682 TRIM41Q8WV44 630 aa21.1■□□□□ 0.97
SH3TC1-225ENST00000515682 CCER1Q8TC90 406 aaPredicted RBP21.02■□□□□ 0.96
SH3TC1-225ENST00000515682 CENPBP07199 599 aaPredicted RBP20.94■□□□□ 0.94
SH3TC1-225ENST00000515682 PABPN1Q86U42 306 aaKnown RBP eCLIP20.85■□□□□ 0.93
SH3TC1-225ENST00000515682 CCDC180Q9P1Z9 1646 aa20.83■□□□□ 0.93
SH3TC1-225ENST00000515682 YTHDC1Q96MU7 727 aaKnown RBP20.8■□□□□ 0.92
SH3TC1-225ENST00000515682 SCAF1Q9H7N4 1312 aaKnown RBP20.76■□□□□ 0.91
SH3TC1-225ENST00000515682 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.75■□□□□ 0.91
SH3TC1-225ENST00000515682 DCAF1Q9Y4B6 1507 aa20.75■□□□□ 0.91
SH3TC1-225ENST00000515682 ZCCHC6Q5VYS8 1495 aaKnown RBP20.73■□□□□ 0.91
SH3TC1-225ENST00000515682 GTF3C3Q9Y5Q9 886 aa20.62■□□□□ 0.89
SH3TC1-225ENST00000515682 MYT1Q01538 1121 aa20.6■□□□□ 0.89
SH3TC1-225ENST00000515682 DIEXFQ68CQ4 756 aaKnown RBP20.58■□□□□ 0.88
SH3TC1-225ENST00000515682 ACIN1Q9UKV3 1341 aaKnown RBP20.54■□□□□ 0.88
SH3TC1-225ENST00000515682 NEUROD1Q13562 356 aa20.46■□□□□ 0.87
SH3TC1-225ENST00000515682 RANGAP1P46060 587 aaPredicted RBP20.43■□□□□ 0.86
SH3TC1-225ENST00000515682 APLP2Q06481 763 aa20.39■□□□□ 0.85
SH3TC1-225ENST00000515682 SCRIBQ14160 1630 aa20.38■□□□□ 0.85
SH3TC1-225ENST00000515682 UBTFP17480 764 aaKnown RBP20.36■□□□□ 0.85
SH3TC1-225ENST00000515682 HNRNPUL2Q1KMD3 747 aaKnown RBP20.23■□□□□ 0.83
SH3TC1-225ENST00000515682 RB1CC1Q8TDY2 1594 aa20.1■□□□□ 0.81
SH3TC1-225ENST00000515682 ZNF316A6NFI3 1004 aaPredicted RBP20.09■□□□□ 0.81
SH3TC1-225ENST00000515682 ATP1B4Q9UN42 357 aaPredicted RBP20.06■□□□□ 0.8
SH3TC1-225ENST00000515682 NACADO15069 1562 aa20.05■□□□□ 0.8
SH3TC1-225ENST00000515682 MIER1Q8N108 512 aa19.86■□□□□ 0.77
SH3TC1-225ENST00000515682 RSF1Q96T23 1441 aaPredicted RBP19.82■□□□□ 0.76
SH3TC1-225ENST00000515682 ITGAEP38570 1179 aa19.79■□□□□ 0.76
SH3TC1-225ENST00000515682 BCANQ96GW7 911 aa19.79■□□□□ 0.76
SH3TC1-225ENST00000515682 NEFLP07196 543 aa19.77■□□□□ 0.76
SH3TC1-225ENST00000515682 ERICH6Q7L0X2 663 aa19.73■□□□□ 0.75
SH3TC1-225ENST00000515682 CECR2Q9BXF3 1484 aa19.65■□□□□ 0.74
SH3TC1-225ENST00000515682 CSRNP3Q8WYN3 585 aa19.64■□□□□ 0.73
SH3TC1-225ENST00000515682 CEP162Q5TB80 1403 aa19.51■□□□□ 0.71
SH3TC1-225ENST00000515682 BAZ1AQ9NRL2 1556 aaPredicted RBP19.46■□□□□ 0.7
SH3TC1-225ENST00000515682 FBLN2P98095 1184 aa19.41■□□□□ 0.7
SH3TC1-225ENST00000515682 BAZ1BQ9UIG0 1483 aaKnown RBP19.41■□□□□ 0.7
SH3TC1-225ENST00000515682 FKBP8Q14318 412 aa19.41■□□□□ 0.7
SH3TC1-225ENST00000515682 SUPT16HQ9Y5B9 1047 aaKnown RBP19.38■□□□□ 0.69
SH3TC1-225ENST00000515682 MROH2BQ7Z745 1585 aa19.37■□□□□ 0.69
SH3TC1-225ENST00000515682 CLSPNQ9HAW4 1339 aa19.33■□□□□ 0.68
SH3TC1-225ENST00000515682 ANP32EQ9BTT0 268 aa19.3■□□□□ 0.68
SH3TC1-225ENST00000515682 P3H3Q8IVL6 736 aa19.28■□□□□ 0.68
SH3TC1-225ENST00000515682 TNIKQ9UKE5 1360 aa19.27■□□□□ 0.68
SH3TC1-225ENST00000515682 DDX10Q13206 875 aaKnown RBP19.26■□□□□ 0.67
SH3TC1-225ENST00000515682 SOGA1O94964 1423 aa19.25■□□□□ 0.67
SH3TC1-225ENST00000515682 FAM50AQ14320 339 aaKnown RBP19.24■□□□□ 0.67
SH3TC1-225ENST00000515682 TRIM52Q96A61 297 aa19.22■□□□□ 0.67
SH3TC1-225ENST00000515682 CLIP1P30622 1438 aa19.21■□□□□ 0.67
SH3TC1-225ENST00000515682 CNGB1Q14028 1251 aaPredicted RBP19.2■□□□□ 0.66
SH3TC1-225ENST00000515682 ANP32CO43423 234 aa19.19■□□□□ 0.66
SH3TC1-225ENST00000515682 CCDC88BA6NC98 1476 aa19.17■□□□□ 0.66
SH3TC1-225ENST00000515682 HIRIP3Q9BW71 556 aaPredicted RBP19.16■□□□□ 0.66
SH3TC1-225ENST00000515682 TSHZ2Q9NRE2 1034 aa19.16■□□□□ 0.66
SH3TC1-225ENST00000515682 ABCC8Q09428 1581 aa19.16■□□□□ 0.66
SH3TC1-225ENST00000515682 WRNQ14191 1432 aaPredicted RBP eCLIP19.15■□□□□ 0.66
SH3TC1-225ENST00000515682 GOLGA3Q08378 1498 aa19.14■□□□□ 0.65
SH3TC1-225ENST00000515682 BCL11AQ9H165 835 aa19.13■□□□□ 0.65
SH3TC1-225ENST00000515682 MYT1LQ9UL68 1186 aa19.12■□□□□ 0.65
SH3TC1-225ENST00000515682 CDK11AQ9UQ88 783 aaPredicted RBP19.11■□□□□ 0.65
SH3TC1-225ENST00000515682 ARID3CA6NKF2 412 aa19.09■□□□□ 0.65
SH3TC1-225ENST00000515682 WIZO95785 1651 aa19.07■□□□□ 0.64
SH3TC1-225ENST00000515682 IRX6P78412 446 aaPredicted RBP19.06■□□□□ 0.64
SH3TC1-225ENST00000515682 EEA1Q15075 1411 aa19.05■□□□□ 0.64
SH3TC1-225ENST00000515682 SMARCA2P51531 1590 aa19.03■□□□□ 0.64
SH3TC1-225ENST00000515682 POLR3GLQ9BT43 218 aa19.02■□□□□ 0.64
SH3TC1-225ENST00000515682 KCNH8Q96L42 1107 aa19.01■□□□□ 0.63
SH3TC1-225ENST00000515682 HNRNPUQ00839 825 aaKnown RBP eCLIP18.99■□□□□ 0.63
SH3TC1-225ENST00000515682 ATAD2BQ9ULI0 1458 aa18.97■□□□□ 0.63
SH3TC1-225ENST00000515682 RUSC2Q8N2Y8 1516 aa18.97■□□□□ 0.63
SH3TC1-225ENST00000515682 SMARCA4P51532 1647 aa18.93■□□□□ 0.62
SH3TC1-225ENST00000515682 RBM19Q9Y4C8 960 aaKnown RBP18.93■□□□□ 0.62
SH3TC1-225ENST00000515682 CEP164Q9UPV0 1460 aa18.92■□□□□ 0.62
SH3TC1-225ENST00000515682 TOP2AP11388 1531 aaKnown RBP18.91■□□□□ 0.62
SH3TC1-225ENST00000515682 CHMP7Q8WUX9 453 aaPredicted RBP18.9■□□□□ 0.62
SH3TC1-225ENST00000515682 RTL5Q5HYW3 569 aaPredicted RBP18.89■□□□□ 0.61
SH3TC1-225ENST00000515682 SIN3AQ96ST3 1273 aa18.89■□□□□ 0.61
SH3TC1-225ENST00000515682 VPS8Q8N3P4 1428 aa18.87■□□□□ 0.61
SH3TC1-225ENST00000515682 KIF27Q86VH2 1401 aa18.87■□□□□ 0.61
SH3TC1-225ENST00000515682 KANK4Q5T7N3 995 aaPredicted RBP18.87■□□□□ 0.61
SH3TC1-225ENST00000515682 NBR1Q14596 966 aa18.83■□□□□ 0.61
SH3TC1-225ENST00000515682 ERCC6Q03468 1493 aa18.82■□□□□ 0.6
SH3TC1-225ENST00000515682 DHX57Q6P158 1386 aaKnown RBP18.8■□□□□ 0.6
SH3TC1-225ENST00000515682 TONSLQ96HA7 1378 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms