RNA–Protein interactions for RNA: ENST00000515682.5

SH3TC1-225, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 2

Gene SH3TC1, Length 4,293 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-225ENST00000515682 NISCHQ9Y2I1 1504 aa24.96■■□□□ 1.59
SH3TC1-225ENST00000515682 DCAF8L2P0C7V8 631 aa23.77■■□□□ 1.4
SH3TC1-225ENST00000515682 SUPT5HO00267 1087 aaKnown RBP22.97■■□□□ 1.27
SH3TC1-225ENST00000515682 SHROOM4Q9ULL8 1493 aa22.87■■□□□ 1.25
SH3TC1-225ENST00000515682 PCGF6Q9BYE7 350 aa22.36■■□□□ 1.17
SH3TC1-225ENST00000515682 HRCP23327 699 aa22.11■■□□□ 1.13
SH3TC1-225ENST00000515682 PPARGC1BQ86YN6 1023 aaKnown RBP21.92■■□□□ 1.1
SH3TC1-225ENST00000515682 EHMT2Q96KQ7 1210 aa21.74■■□□□ 1.07
SH3TC1-225ENST00000515682 CHIC1Q5VXU3 224 aa21.69■■□□□ 1.06
SH3TC1-225ENST00000515682 LOC105371045A0A1W2PR82 267 aa21.52■■□□□ 1.04
SH3TC1-225ENST00000515682 FAM9AQ8IZU1 332 aaPredicted RBP21.46■■□□□ 1.03
SH3TC1-225ENST00000515682 PELP1Q8IZL8 1130 aaKnown RBP21.41■■□□□ 1.02
SH3TC1-225ENST00000515682 ABCC9O60706 1549 aa21.35■■□□□ 1.01
SH3TC1-225ENST00000515682 TRIM26Q12899 539 aaPredicted RBP21.34■■□□□ 1.01
SH3TC1-225ENST00000515682 ZEB1P37275 1124 aaPredicted RBP21.28■■□□□ 1
SH3TC1-225ENST00000515682 MYO15BQ96JP2 1530 aa21.16■□□□□ 0.98
SH3TC1-225ENST00000515682 TTBK1Q5TCY1 1321 aaPredicted RBP21.12■□□□□ 0.97
SH3TC1-225ENST00000515682 TRIM41Q8WV44 630 aa21.1■□□□□ 0.97
SH3TC1-225ENST00000515682 CCER1Q8TC90 406 aaPredicted RBP21.02■□□□□ 0.96
SH3TC1-225ENST00000515682 CENPBP07199 599 aaPredicted RBP20.94■□□□□ 0.94
SH3TC1-225ENST00000515682 PABPN1Q86U42 306 aaKnown RBP eCLIP20.85■□□□□ 0.93
SH3TC1-225ENST00000515682 CCDC180Q9P1Z9 1646 aa20.83■□□□□ 0.93
SH3TC1-225ENST00000515682 YTHDC1Q96MU7 727 aaKnown RBP20.8■□□□□ 0.92
SH3TC1-225ENST00000515682 SCAF1Q9H7N4 1312 aaKnown RBP20.76■□□□□ 0.91
SH3TC1-225ENST00000515682 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.75■□□□□ 0.91
SH3TC1-225ENST00000515682 DCAF1Q9Y4B6 1507 aa20.75■□□□□ 0.91
SH3TC1-225ENST00000515682 ZCCHC6Q5VYS8 1495 aaKnown RBP20.73■□□□□ 0.91
SH3TC1-225ENST00000515682 GTF3C3Q9Y5Q9 886 aa20.62■□□□□ 0.89
SH3TC1-225ENST00000515682 MYT1Q01538 1121 aa20.6■□□□□ 0.89
SH3TC1-225ENST00000515682 DIEXFQ68CQ4 756 aaKnown RBP20.58■□□□□ 0.88
SH3TC1-225ENST00000515682 ACIN1Q9UKV3 1341 aaKnown RBP20.54■□□□□ 0.88
SH3TC1-225ENST00000515682 NEUROD1Q13562 356 aa20.46■□□□□ 0.87
SH3TC1-225ENST00000515682 RANGAP1P46060 587 aaPredicted RBP20.43■□□□□ 0.86
SH3TC1-225ENST00000515682 APLP2Q06481 763 aa20.39■□□□□ 0.85
SH3TC1-225ENST00000515682 SCRIBQ14160 1630 aa20.38■□□□□ 0.85
SH3TC1-225ENST00000515682 UBTFP17480 764 aaKnown RBP20.36■□□□□ 0.85
SH3TC1-225ENST00000515682 HNRNPUL2Q1KMD3 747 aaKnown RBP20.23■□□□□ 0.83
SH3TC1-225ENST00000515682 RB1CC1Q8TDY2 1594 aa20.1■□□□□ 0.81
SH3TC1-225ENST00000515682 ZNF316A6NFI3 1004 aaPredicted RBP20.09■□□□□ 0.81
SH3TC1-225ENST00000515682 ATP1B4Q9UN42 357 aaPredicted RBP20.06■□□□□ 0.8
SH3TC1-225ENST00000515682 NACADO15069 1562 aa20.05■□□□□ 0.8
SH3TC1-225ENST00000515682 MIER1Q8N108 512 aa19.86■□□□□ 0.77
SH3TC1-225ENST00000515682 RSF1Q96T23 1441 aaPredicted RBP19.82■□□□□ 0.76
SH3TC1-225ENST00000515682 ITGAEP38570 1179 aa19.79■□□□□ 0.76
SH3TC1-225ENST00000515682 BCANQ96GW7 911 aa19.79■□□□□ 0.76
SH3TC1-225ENST00000515682 NEFLP07196 543 aa19.77■□□□□ 0.76
SH3TC1-225ENST00000515682 ERICH6Q7L0X2 663 aa19.73■□□□□ 0.75
SH3TC1-225ENST00000515682 CECR2Q9BXF3 1484 aa19.65■□□□□ 0.74
SH3TC1-225ENST00000515682 CSRNP3Q8WYN3 585 aa19.64■□□□□ 0.73
SH3TC1-225ENST00000515682 CEP162Q5TB80 1403 aa19.51■□□□□ 0.71
SH3TC1-225ENST00000515682 BAZ1AQ9NRL2 1556 aaPredicted RBP19.46■□□□□ 0.7
SH3TC1-225ENST00000515682 FBLN2P98095 1184 aa19.41■□□□□ 0.7
SH3TC1-225ENST00000515682 BAZ1BQ9UIG0 1483 aaKnown RBP19.41■□□□□ 0.7
SH3TC1-225ENST00000515682 FKBP8Q14318 412 aa19.41■□□□□ 0.7
SH3TC1-225ENST00000515682 SUPT16HQ9Y5B9 1047 aaKnown RBP19.38■□□□□ 0.69
SH3TC1-225ENST00000515682 MROH2BQ7Z745 1585 aa19.37■□□□□ 0.69
SH3TC1-225ENST00000515682 CLSPNQ9HAW4 1339 aa19.33■□□□□ 0.68
SH3TC1-225ENST00000515682 ANP32EQ9BTT0 268 aa19.3■□□□□ 0.68
SH3TC1-225ENST00000515682 P3H3Q8IVL6 736 aa19.28■□□□□ 0.68
SH3TC1-225ENST00000515682 TNIKQ9UKE5 1360 aa19.27■□□□□ 0.68
SH3TC1-225ENST00000515682 DDX10Q13206 875 aaKnown RBP19.26■□□□□ 0.67
SH3TC1-225ENST00000515682 SOGA1O94964 1423 aa19.25■□□□□ 0.67
SH3TC1-225ENST00000515682 FAM50AQ14320 339 aaKnown RBP19.24■□□□□ 0.67
SH3TC1-225ENST00000515682 TRIM52Q96A61 297 aa19.22■□□□□ 0.67
SH3TC1-225ENST00000515682 CLIP1P30622 1438 aa19.21■□□□□ 0.67
SH3TC1-225ENST00000515682 CNGB1Q14028 1251 aaPredicted RBP19.2■□□□□ 0.66
SH3TC1-225ENST00000515682 ANP32CO43423 234 aa19.19■□□□□ 0.66
SH3TC1-225ENST00000515682 CCDC88BA6NC98 1476 aa19.17■□□□□ 0.66
SH3TC1-225ENST00000515682 HIRIP3Q9BW71 556 aaPredicted RBP19.16■□□□□ 0.66
SH3TC1-225ENST00000515682 TSHZ2Q9NRE2 1034 aa19.16■□□□□ 0.66
SH3TC1-225ENST00000515682 ABCC8Q09428 1581 aa19.16■□□□□ 0.66
SH3TC1-225ENST00000515682 WRNQ14191 1432 aaPredicted RBP eCLIP19.15■□□□□ 0.66
SH3TC1-225ENST00000515682 GOLGA3Q08378 1498 aa19.14■□□□□ 0.65
SH3TC1-225ENST00000515682 BCL11AQ9H165 835 aa19.13■□□□□ 0.65
SH3TC1-225ENST00000515682 MYT1LQ9UL68 1186 aa19.12■□□□□ 0.65
SH3TC1-225ENST00000515682 CDK11AQ9UQ88 783 aaPredicted RBP19.11■□□□□ 0.65
SH3TC1-225ENST00000515682 ARID3CA6NKF2 412 aa19.09■□□□□ 0.65
SH3TC1-225ENST00000515682 WIZO95785 1651 aa19.07■□□□□ 0.64
SH3TC1-225ENST00000515682 IRX6P78412 446 aaPredicted RBP19.06■□□□□ 0.64
SH3TC1-225ENST00000515682 EEA1Q15075 1411 aa19.05■□□□□ 0.64
SH3TC1-225ENST00000515682 SMARCA2P51531 1590 aa19.03■□□□□ 0.64
SH3TC1-225ENST00000515682 POLR3GLQ9BT43 218 aa19.02■□□□□ 0.64
SH3TC1-225ENST00000515682 KCNH8Q96L42 1107 aa19.01■□□□□ 0.63
SH3TC1-225ENST00000515682 HNRNPUQ00839 825 aaKnown RBP eCLIP18.99■□□□□ 0.63
SH3TC1-225ENST00000515682 ATAD2BQ9ULI0 1458 aa18.97■□□□□ 0.63
SH3TC1-225ENST00000515682 RUSC2Q8N2Y8 1516 aa18.97■□□□□ 0.63
SH3TC1-225ENST00000515682 SMARCA4P51532 1647 aa18.93■□□□□ 0.62
SH3TC1-225ENST00000515682 RBM19Q9Y4C8 960 aaKnown RBP18.93■□□□□ 0.62
SH3TC1-225ENST00000515682 CEP164Q9UPV0 1460 aa18.92■□□□□ 0.62
SH3TC1-225ENST00000515682 TOP2AP11388 1531 aaKnown RBP18.91■□□□□ 0.62
SH3TC1-225ENST00000515682 CHMP7Q8WUX9 453 aaPredicted RBP18.9■□□□□ 0.62
SH3TC1-225ENST00000515682 RTL5Q5HYW3 569 aaPredicted RBP18.89■□□□□ 0.61
SH3TC1-225ENST00000515682 SIN3AQ96ST3 1273 aa18.89■□□□□ 0.61
SH3TC1-225ENST00000515682 VPS8Q8N3P4 1428 aa18.87■□□□□ 0.61
SH3TC1-225ENST00000515682 KIF27Q86VH2 1401 aa18.87■□□□□ 0.61
SH3TC1-225ENST00000515682 KANK4Q5T7N3 995 aaPredicted RBP18.87■□□□□ 0.61
SH3TC1-225ENST00000515682 NBR1Q14596 966 aa18.83■□□□□ 0.61
SH3TC1-225ENST00000515682 ERCC6Q03468 1493 aa18.82■□□□□ 0.6
SH3TC1-225ENST00000515682 DHX57Q6P158 1386 aaKnown RBP18.8■□□□□ 0.6
SH3TC1-225ENST00000515682 TONSLQ96HA7 1378 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms