RNA–Protein interactions for RNA: ENST00000506360.5

SH3TC1-210, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 2

Gene SH3TC1, Length 5,829 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-210ENST00000506360 DCAF8L2P0C7V8 631 aa28.15■■■□□ 2.1
SH3TC1-210ENST00000506360 SUPT5HO00267 1087 aaKnown RBP26.59■■□□□ 1.85
SH3TC1-210ENST00000506360 EHMT2Q96KQ7 1210 aa26.04■■□□□ 1.76
SH3TC1-210ENST00000506360 SHROOM4Q9ULL8 1493 aa26.03■■□□□ 1.76
SH3TC1-210ENST00000506360 NISCHQ9Y2I1 1504 aa25.86■■□□□ 1.73
SH3TC1-210ENST00000506360 PELP1Q8IZL8 1130 aaKnown RBP25.68■■□□□ 1.7
SH3TC1-210ENST00000506360 APLP2Q06481 763 aa25.56■■□□□ 1.68
SH3TC1-210ENST00000506360 FAM9AQ8IZU1 332 aaPredicted RBP25.19■■□□□ 1.62
SH3TC1-210ENST00000506360 TTBK1Q5TCY1 1321 aaPredicted RBP25.17■■□□□ 1.62
SH3TC1-210ENST00000506360 RANGAP1P46060 587 aaPredicted RBP24.9■■□□□ 1.58
SH3TC1-210ENST00000506360 PCGF6Q9BYE7 350 aa24.86■■□□□ 1.57
SH3TC1-210ENST00000506360 ATP1B4Q9UN42 357 aaPredicted RBP24.73■■□□□ 1.55
SH3TC1-210ENST00000506360 ERICH6Q7L0X2 663 aa24.71■■□□□ 1.55
SH3TC1-210ENST00000506360 CENPBP07199 599 aaPredicted RBP24.6■■□□□ 1.53
SH3TC1-210ENST00000506360 TRIM41Q8WV44 630 aa24.58■■□□□ 1.53
SH3TC1-210ENST00000506360 CCER1Q8TC90 406 aaPredicted RBP24.58■■□□□ 1.52
SH3TC1-210ENST00000506360 ZEB1P37275 1124 aaPredicted RBP24.48■■□□□ 1.51
SH3TC1-210ENST00000506360 UBTFP17480 764 aaKnown RBP24.43■■□□□ 1.5
SH3TC1-210ENST00000506360 NEFLP07196 543 aa24.23■■□□□ 1.47
SH3TC1-210ENST00000506360 YTHDC1Q96MU7 727 aaKnown RBP24.18■■□□□ 1.46
SH3TC1-210ENST00000506360 PPARGC1BQ86YN6 1023 aaKnown RBP24.02■■□□□ 1.44
SH3TC1-210ENST00000506360 MYT1LQ9UL68 1186 aa23.89■■□□□ 1.42
SH3TC1-210ENST00000506360 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.81■■□□□ 1.4
SH3TC1-210ENST00000506360 HNRNPUL2Q1KMD3 747 aaKnown RBP23.81■■□□□ 1.4
SH3TC1-210ENST00000506360 POLR3GLQ9BT43 218 aa23.79■■□□□ 1.4
SH3TC1-210ENST00000506360 ITGAEP38570 1179 aa23.78■■□□□ 1.4
SH3TC1-210ENST00000506360 TRIM26Q12899 539 aaPredicted RBP23.68■■□□□ 1.38
SH3TC1-210ENST00000506360 DAXXQ9UER7 740 aaPredicted RBP23.67■■□□□ 1.38
SH3TC1-210ENST00000506360 CNGB1Q14028 1251 aaPredicted RBP23.55■■□□□ 1.36
SH3TC1-210ENST00000506360 MYT1Q01538 1121 aa23.54■■□□□ 1.36
SH3TC1-210ENST00000506360 CHIC1Q5VXU3 224 aa23.5■■□□□ 1.35
SH3TC1-210ENST00000506360 HRCP23327 699 aa23.42■■□□□ 1.34
SH3TC1-210ENST00000506360 SLC4A1APQ9BWU0 796 aaKnown RBP23.41■■□□□ 1.34
SH3TC1-210ENST00000506360 LOC105371045A0A1W2PR82 267 aa23.37■■□□□ 1.33
SH3TC1-210ENST00000506360 CLSPNQ9HAW4 1339 aa23.15■■□□□ 1.3
SH3TC1-210ENST00000506360 FAM50AQ14320 339 aaKnown RBP23.12■■□□□ 1.29
SH3TC1-210ENST00000506360 ZNF316A6NFI3 1004 aaPredicted RBP23.11■■□□□ 1.29
SH3TC1-210ENST00000506360 TRIM52Q96A61 297 aa23.06■■□□□ 1.28
SH3TC1-210ENST00000506360 RTL5Q5HYW3 569 aaPredicted RBP23■■□□□ 1.27
SH3TC1-210ENST00000506360 DIEXFQ68CQ4 756 aaKnown RBP22.98■■□□□ 1.27
SH3TC1-210ENST00000506360 NEUROD1Q13562 356 aa22.93■■□□□ 1.26
SH3TC1-210ENST00000506360 ZNF326Q5BKZ1 582 aaKnown RBP22.84■■□□□ 1.25
SH3TC1-210ENST00000506360 PABPN1Q86U42 306 aaKnown RBP eCLIP22.83■■□□□ 1.25
SH3TC1-210ENST00000506360 BCANQ96GW7 911 aa22.74■■□□□ 1.23
SH3TC1-210ENST00000506360 ZBTB47Q9UFB7 747 aaPredicted RBP22.73■■□□□ 1.23
SH3TC1-210ENST00000506360 FBLN2P98095 1184 aa22.73■■□□□ 1.23
SH3TC1-210ENST00000506360 ANP32CO43423 234 aa22.7■■□□□ 1.22
SH3TC1-210ENST00000506360 ABCC9O60706 1549 aa22.67■■□□□ 1.22
SH3TC1-210ENST00000506360 SLC24A1O60721 1099 aa22.66■■□□□ 1.22
SH3TC1-210ENST00000506360 BCL11AQ9H165 835 aa22.6■■□□□ 1.21
SH3TC1-210ENST00000506360 CANXP27824 592 aaKnown RBP22.59■■□□□ 1.21
SH3TC1-210ENST00000506360 CDK11AQ9UQ88 783 aaPredicted RBP22.56■■□□□ 1.2
SH3TC1-210ENST00000506360 ARID3CA6NKF2 412 aa22.51■■□□□ 1.19
SH3TC1-210ENST00000506360 NEFMP07197 916 aa22.51■■□□□ 1.19
SH3TC1-210ENST00000506360 GTF3C3Q9Y5Q9 886 aa22.49■■□□□ 1.19
SH3TC1-210ENST00000506360 P3H3Q8IVL6 736 aa22.46■■□□□ 1.19
SH3TC1-210ENST00000506360 ZNF777Q9ULD5 760 aaPredicted RBP22.39■■□□□ 1.17
SH3TC1-210ENST00000506360 ESF1Q9H501 851 aaKnown RBP22.23■■□□□ 1.15
SH3TC1-210ENST00000506360 ANP32AP39687 249 aaKnown RBP22.21■■□□□ 1.15
SH3TC1-210ENST00000506360 CSRNP3Q8WYN3 585 aa22.2■■□□□ 1.14
SH3TC1-210ENST00000506360 NPM2Q86SE8 214 aaKnown RBP22.19■■□□□ 1.14
SH3TC1-210ENST00000506360 CHGAP10645 457 aaKnown RBP22.16■■□□□ 1.14
SH3TC1-210ENST00000506360 STAG3Q9UJ98 1225 aa22.15■■□□□ 1.14
SH3TC1-210ENST00000506360 PLPPR3Q6T4P5 718 aa22.12■■□□□ 1.13
SH3TC1-210ENST00000506360 TONSLQ96HA7 1378 aa22.06■■□□□ 1.12
SH3TC1-210ENST00000506360 ACIN1Q9UKV3 1341 aaKnown RBP22.04■■□□□ 1.12
SH3TC1-210ENST00000506360 HSP90AA1P07900 732 aaKnown RBP22.02■■□□□ 1.12
SH3TC1-210ENST00000506360 ANP32BQ92688 251 aaKnown RBP21.97■■□□□ 1.11
SH3TC1-210ENST00000506360 FKBP8Q14318 412 aa21.97■■□□□ 1.11
SH3TC1-210ENST00000506360 NPM1P06748 294 aaKnown RBP eCLIP21.97■■□□□ 1.11
SH3TC1-210ENST00000506360 FAM9BQ8IZU0 186 aa21.96■■□□□ 1.11
SH3TC1-210ENST00000506360 HNRNPUQ00839 825 aaKnown RBP eCLIP21.95■■□□□ 1.1
SH3TC1-210ENST00000506360 UPF2Q9HAU5 1272 aaKnown RBP21.94■■□□□ 1.1
SH3TC1-210ENST00000506360 SALL2Q9Y467 1007 aaPredicted RBP21.93■■□□□ 1.1
SH3TC1-210ENST00000506360 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.91■■□□□ 1.1
SH3TC1-210ENST00000506360 DDX10Q13206 875 aaKnown RBP21.88■■□□□ 1.09
SH3TC1-210ENST00000506360 CHIC2Q9UKJ5 165 aa21.87■■□□□ 1.09
SH3TC1-210ENST00000506360 TMC1Q8TDI8 760 aa21.81■■□□□ 1.08
SH3TC1-210ENST00000506360 SCRIBQ14160 1630 aa21.8■■□□□ 1.08
SH3TC1-210ENST00000506360 WDR43Q15061 677 aaKnown RBP eCLIP21.79■■□□□ 1.08
SH3TC1-210ENST00000506360 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.77■■□□□ 1.08
SH3TC1-210ENST00000506360 SCAF1Q9H7N4 1312 aaKnown RBP21.76■■□□□ 1.07
SH3TC1-210ENST00000506360 EIF5BO60841 1220 aaKnown RBP21.76■■□□□ 1.07
SH3TC1-210ENST00000506360 KDM2AQ9Y2K7 1162 aa21.76■■□□□ 1.07
SH3TC1-210ENST00000506360 CCDC136Q96JN2 1154 aa21.74■■□□□ 1.07
SH3TC1-210ENST00000506360 TSPY4P0CV99 314 aa21.71■■□□□ 1.07
SH3TC1-210ENST00000506360 TSPY10P0CW01 314 aa21.71■■□□□ 1.07
SH3TC1-210ENST00000506360 MRS2Q9HD23 443 aa21.67■■□□□ 1.06
SH3TC1-210ENST00000506360 A0A0G2JS52 829 aa21.66■■□□□ 1.06
SH3TC1-210ENST00000506360 ARXQ96QS3 562 aa21.63■■□□□ 1.05
SH3TC1-210ENST00000506360 MTUS2Q5JR59 1369 aa21.63■■□□□ 1.05
SH3TC1-210ENST00000506360 ZBTB7CA1YPR0 619 aa21.61■■□□□ 1.05
SH3TC1-210ENST00000506360 NBR1Q14596 966 aa21.61■■□□□ 1.05
SH3TC1-210ENST00000506360 MYH16Q9H6N6 1097 aa21.6■■□□□ 1.05
SH3TC1-210ENST00000506360 SENP3Q9H4L4 574 aaPredicted RBP21.6■■□□□ 1.05
SH3TC1-210ENST00000506360 CHMP7Q8WUX9 453 aaPredicted RBP21.59■■□□□ 1.05
SH3TC1-210ENST00000506360 PLEKHG5O94827 1062 aa21.58■■□□□ 1.05
SH3TC1-210ENST00000506360 C14orf37Q86TY3 774 aa21.55■■□□□ 1.04
SH3TC1-210ENST00000506360 HIRIP3Q9BW71 556 aaPredicted RBP21.54■■□□□ 1.04
SH3TC1-210ENST00000506360 IRX6P78412 446 aaPredicted RBP21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms