Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.21■□□□□ 0.51
NR1H4Q96RI1 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
NR1H4Q96RI1 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NR1H4Q96RI1 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NR1H4Q96RI1 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
NR1H4Q96RI1 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NR1H4Q96RI1 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.5
NR1H4Q96RI1 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.21■□□□□ 0.5
NR1H4Q96RI1 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.5
NR1H4Q96RI1 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
NR1H4Q96RI1 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
NR1H4Q96RI1 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NR1H4Q96RI1 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
NR1H4Q96RI1 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC18.2■□□□□ 0.5
NR1H4Q96RI1 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC18.2■□□□□ 0.5
NR1H4Q96RI1 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC18.2■□□□□ 0.5
NR1H4Q96RI1 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.2■□□□□ 0.5
NR1H4Q96RI1 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NR1H4Q96RI1 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC18.2■□□□□ 0.5
NR1H4Q96RI1 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
NR1H4Q96RI1 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
NR1H4Q96RI1 DUX4L19-201ENST00000557448 1267 ntBASIC18.2■□□□□ 0.5
NR1H4Q96RI1 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NR1H4Q96RI1 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
NR1H4Q96RI1 AC141586.3-201ENST00000562166 1838 ntBASIC18.2■□□□□ 0.5
NR1H4Q96RI1 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NR1H4Q96RI1 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
NR1H4Q96RI1 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NR1H4Q96RI1 AL512353.2-201ENST00000448759 1962 ntBASIC18.2■□□□□ 0.5
NR1H4Q96RI1 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
NR1H4Q96RI1 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NR1H4Q96RI1 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NR1H4Q96RI1 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.2■□□□□ 0.5
NR1H4Q96RI1 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NR1H4Q96RI1 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.2■□□□□ 0.5
NR1H4Q96RI1 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
NR1H4Q96RI1 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
NR1H4Q96RI1 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NR1H4Q96RI1 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NR1H4Q96RI1 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
NR1H4Q96RI1 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.2■□□□□ 0.5
NR1H4Q96RI1 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.2■□□□□ 0.5
NR1H4Q96RI1 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NR1H4Q96RI1 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.19■□□□□ 0.5
NR1H4Q96RI1 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.19■□□□□ 0.5
NR1H4Q96RI1 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NR1H4Q96RI1 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.19■□□□□ 0.5
NR1H4Q96RI1 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
NR1H4Q96RI1 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC18.19■□□□□ 0.5
NR1H4Q96RI1 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.19■□□□□ 0.5
NR1H4Q96RI1 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NR1H4Q96RI1 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NR1H4Q96RI1 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC18.19■□□□□ 0.5
NR1H4Q96RI1 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.19■□□□□ 0.5
NR1H4Q96RI1 PXK-203ENST00000383715 1756 ntTSL 5 BASIC18.19■□□□□ 0.5
NR1H4Q96RI1 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NR1H4Q96RI1 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
NR1H4Q96RI1 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NR1H4Q96RI1 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NR1H4Q96RI1 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.19■□□□□ 0.5
NR1H4Q96RI1 PCDHA12-202ENST00000613593 2588 ntBASIC18.19■□□□□ 0.5
NR1H4Q96RI1 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NR1H4Q96RI1 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
NR1H4Q96RI1 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.18■□□□□ 0.5
NR1H4Q96RI1 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.18■□□□□ 0.5
NR1H4Q96RI1 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NR1H4Q96RI1 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC18.18■□□□□ 0.5
NR1H4Q96RI1 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NR1H4Q96RI1 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
NR1H4Q96RI1 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NR1H4Q96RI1 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NR1H4Q96RI1 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.18■□□□□ 0.5
NR1H4Q96RI1 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
NR1H4Q96RI1 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NR1H4Q96RI1 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NR1H4Q96RI1 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
NR1H4Q96RI1 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
NR1H4Q96RI1 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
NR1H4Q96RI1 FXN-202ENST00000396364 980 ntTSL 5 BASIC18.18■□□□□ 0.5
NR1H4Q96RI1 AP005435.1-201ENST00000529293 1178 ntBASIC18.18■□□□□ 0.5
NR1H4Q96RI1 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC18.18■□□□□ 0.5
NR1H4Q96RI1 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC18.18■□□□□ 0.5
NR1H4Q96RI1 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.18■□□□□ 0.5
NR1H4Q96RI1 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NR1H4Q96RI1 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC18.18■□□□□ 0.5
NR1H4Q96RI1 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
NR1H4Q96RI1 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NR1H4Q96RI1 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
NR1H4Q96RI1 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.18■□□□□ 0.5
NR1H4Q96RI1 AC073592.3-201ENST00000625118 1834 ntBASIC18.18■□□□□ 0.5
NR1H4Q96RI1 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NR1H4Q96RI1 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
NR1H4Q96RI1 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NR1H4Q96RI1 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
NR1H4Q96RI1 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NR1H4Q96RI1 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NR1H4Q96RI1 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
NR1H4Q96RI1 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
NR1H4Q96RI1 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
NR1H4Q96RI1 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms