Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
VPS52Q8N1B4 TSPY14P-201ENST00000303979 915 ntBASIC20.95■□□□□ 0.94
VPS52Q8N1B4 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
VPS52Q8N1B4 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC20.95■□□□□ 0.94
VPS52Q8N1B4 ATP5G1P1-201ENST00000448724 379 ntBASIC20.95■□□□□ 0.94
VPS52Q8N1B4 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
VPS52Q8N1B4 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
VPS52Q8N1B4 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC20.95■□□□□ 0.94
VPS52Q8N1B4 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
VPS52Q8N1B4 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.95■□□□□ 0.94
VPS52Q8N1B4 PHGDH-210ENST00000641115 1638 ntBASIC20.95■□□□□ 0.94
VPS52Q8N1B4 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
VPS52Q8N1B4 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
VPS52Q8N1B4 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
VPS52Q8N1B4 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.95■□□□□ 0.94
VPS52Q8N1B4 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
VPS52Q8N1B4 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
VPS52Q8N1B4 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC20.94■□□□□ 0.94
VPS52Q8N1B4 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
VPS52Q8N1B4 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
VPS52Q8N1B4 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC20.94■□□□□ 0.94
VPS52Q8N1B4 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.94■□□□□ 0.94
VPS52Q8N1B4 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
VPS52Q8N1B4 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC20.94■□□□□ 0.94
VPS52Q8N1B4 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
VPS52Q8N1B4 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC20.94■□□□□ 0.94
VPS52Q8N1B4 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
VPS52Q8N1B4 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC20.94■□□□□ 0.94
VPS52Q8N1B4 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC20.94■□□□□ 0.94
VPS52Q8N1B4 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC20.94■□□□□ 0.94
VPS52Q8N1B4 NTF6B-201ENST00000591913 560 ntBASIC20.94■□□□□ 0.94
VPS52Q8N1B4 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
VPS52Q8N1B4 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.94■□□□□ 0.94
VPS52Q8N1B4 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
VPS52Q8N1B4 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
VPS52Q8N1B4 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
VPS52Q8N1B4 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
VPS52Q8N1B4 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC20.94■□□□□ 0.94
VPS52Q8N1B4 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
VPS52Q8N1B4 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
VPS52Q8N1B4 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
VPS52Q8N1B4 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
VPS52Q8N1B4 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
VPS52Q8N1B4 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
VPS52Q8N1B4 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
VPS52Q8N1B4 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC20.93■□□□□ 0.94
VPS52Q8N1B4 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
VPS52Q8N1B4 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.93■□□□□ 0.94
VPS52Q8N1B4 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
VPS52Q8N1B4 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
VPS52Q8N1B4 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
VPS52Q8N1B4 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC20.93■□□□□ 0.94
VPS52Q8N1B4 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC20.93■□□□□ 0.94
VPS52Q8N1B4 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
VPS52Q8N1B4 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
VPS52Q8N1B4 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
VPS52Q8N1B4 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.93■□□□□ 0.94
VPS52Q8N1B4 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
VPS52Q8N1B4 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
VPS52Q8N1B4 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
VPS52Q8N1B4 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
VPS52Q8N1B4 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
VPS52Q8N1B4 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.92■□□□□ 0.94
VPS52Q8N1B4 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
VPS52Q8N1B4 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
VPS52Q8N1B4 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
VPS52Q8N1B4 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
VPS52Q8N1B4 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
VPS52Q8N1B4 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
VPS52Q8N1B4 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
VPS52Q8N1B4 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
VPS52Q8N1B4 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
VPS52Q8N1B4 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
VPS52Q8N1B4 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.92■□□□□ 0.94
VPS52Q8N1B4 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.92■□□□□ 0.94
VPS52Q8N1B4 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
VPS52Q8N1B4 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
VPS52Q8N1B4 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
VPS52Q8N1B4 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
VPS52Q8N1B4 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
VPS52Q8N1B4 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
VPS52Q8N1B4 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.91■□□□□ 0.94
VPS52Q8N1B4 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.91■□□□□ 0.94
VPS52Q8N1B4 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
VPS52Q8N1B4 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC20.91■□□□□ 0.94
VPS52Q8N1B4 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
VPS52Q8N1B4 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC20.91■□□□□ 0.94
VPS52Q8N1B4 AC128688.1-201ENST00000487626 519 ntBASIC20.91■□□□□ 0.94
VPS52Q8N1B4 FDX2-206ENST00000492239 773 ntTSL 2 BASIC20.91■□□□□ 0.94
VPS52Q8N1B4 SLC25A1P4-201ENST00000567977 778 ntBASIC20.91■□□□□ 0.94
VPS52Q8N1B4 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
VPS52Q8N1B4 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
VPS52Q8N1B4 AC130371.2-201ENST00000619443 611 ntBASIC20.91■□□□□ 0.94
VPS52Q8N1B4 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
VPS52Q8N1B4 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
VPS52Q8N1B4 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.91■□□□□ 0.94
VPS52Q8N1B4 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.9■□□□□ 0.94
VPS52Q8N1B4 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.9■□□□□ 0.94
VPS52Q8N1B4 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
VPS52Q8N1B4 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms