Protein–RNA interactions for Protein: Q8IYT3

CCDC170, Coiled-coil domain-containing protein 170, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170Q8IYT3 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC170Q8IYT3 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC170Q8IYT3 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC170Q8IYT3 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC170Q8IYT3 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC170Q8IYT3 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC170Q8IYT3 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC170Q8IYT3 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC170Q8IYT3 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
CCDC170Q8IYT3 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
CCDC170Q8IYT3 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC20.76■□□□□ 0.91
CCDC170Q8IYT3 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC170Q8IYT3 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC170Q8IYT3 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC170Q8IYT3 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC20.76■□□□□ 0.91
CCDC170Q8IYT3 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.76■□□□□ 0.91
CCDC170Q8IYT3 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC20.76■□□□□ 0.91
CCDC170Q8IYT3 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC170Q8IYT3 AC005829.2-201ENST00000571422 1056 ntBASIC20.76■□□□□ 0.91
CCDC170Q8IYT3 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CCDC170Q8IYT3 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC170Q8IYT3 SDHAP1-207ENST00000440850 2000 ntBASIC20.76■□□□□ 0.91
CCDC170Q8IYT3 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC170Q8IYT3 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC20.76■□□□□ 0.91
CCDC170Q8IYT3 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC20.76■□□□□ 0.91
CCDC170Q8IYT3 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC170Q8IYT3 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC170Q8IYT3 FP475955.4-201ENST00000623131 1990 ntBASIC20.76■□□□□ 0.91
CCDC170Q8IYT3 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC170Q8IYT3 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC170Q8IYT3 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC170Q8IYT3 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC170Q8IYT3 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
CCDC170Q8IYT3 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC20.75■□□□□ 0.91
CCDC170Q8IYT3 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.75■□□□□ 0.91
CCDC170Q8IYT3 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC170Q8IYT3 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC170Q8IYT3 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC20.75■□□□□ 0.91
CCDC170Q8IYT3 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC170Q8IYT3 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC170Q8IYT3 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
CCDC170Q8IYT3 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC170Q8IYT3 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC170Q8IYT3 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC20.74■□□□□ 0.91
CCDC170Q8IYT3 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC170Q8IYT3 IRX1P1-201ENST00000438849 1838 ntBASIC20.74■□□□□ 0.91
CCDC170Q8IYT3 AC090164.3-201ENST00000610780 2143 ntBASIC20.74■□□□□ 0.91
CCDC170Q8IYT3 WIZP1-201ENST00000531444 2299 ntBASIC20.74■□□□□ 0.91
CCDC170Q8IYT3 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
CCDC170Q8IYT3 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC170Q8IYT3 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC170Q8IYT3 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC170Q8IYT3 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC20.74■□□□□ 0.91
CCDC170Q8IYT3 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC170Q8IYT3 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC170Q8IYT3 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC170Q8IYT3 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.74■□□□□ 0.91
CCDC170Q8IYT3 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC170Q8IYT3 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC170Q8IYT3 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
CCDC170Q8IYT3 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC170Q8IYT3 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC170Q8IYT3 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC20.74■□□□□ 0.91
CCDC170Q8IYT3 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC20.74■□□□□ 0.91
CCDC170Q8IYT3 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC170Q8IYT3 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC170Q8IYT3 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC20.74■□□□□ 0.91
CCDC170Q8IYT3 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC170Q8IYT3 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC20.74■□□□□ 0.91
CCDC170Q8IYT3 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
CCDC170Q8IYT3 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC170Q8IYT3 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC20.73■□□□□ 0.91
CCDC170Q8IYT3 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC170Q8IYT3 AC135050.7-201ENST00000624508 2218 ntBASIC20.73■□□□□ 0.91
CCDC170Q8IYT3 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC170Q8IYT3 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC170Q8IYT3 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC170Q8IYT3 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC20.73■□□□□ 0.91
CCDC170Q8IYT3 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC170Q8IYT3 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC170Q8IYT3 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC20.73■□□□□ 0.91
CCDC170Q8IYT3 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC170Q8IYT3 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC170Q8IYT3 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC170Q8IYT3 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC170Q8IYT3 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC20.73■□□□□ 0.91
CCDC170Q8IYT3 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC170Q8IYT3 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CCDC170Q8IYT3 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC170Q8IYT3 CRK-204ENST00000574295 1391 ntTSL 5 BASIC20.72■□□□□ 0.91
CCDC170Q8IYT3 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC170Q8IYT3 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC170Q8IYT3 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC20.72■□□□□ 0.91
CCDC170Q8IYT3 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC170Q8IYT3 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC20.72■□□□□ 0.91
CCDC170Q8IYT3 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC20.72■□□□□ 0.91
CCDC170Q8IYT3 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC170Q8IYT3 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
CCDC170Q8IYT3 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC170Q8IYT3 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms