Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PTCRAQ6ISU1 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
PTCRAQ6ISU1 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PTCRAQ6ISU1 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.98■□□□□ 0.79
PTCRAQ6ISU1 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
PTCRAQ6ISU1 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
PTCRAQ6ISU1 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
PTCRAQ6ISU1 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC19.97■□□□□ 0.79
PTCRAQ6ISU1 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC19.97■□□□□ 0.79
PTCRAQ6ISU1 LINC00265-3P-201ENST00000447588 903 ntBASIC19.97■□□□□ 0.79
PTCRAQ6ISU1 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC19.97■□□□□ 0.79
PTCRAQ6ISU1 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PTCRAQ6ISU1 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.97■□□□□ 0.79
PTCRAQ6ISU1 BMF-207ENST00000559701 630 ntTSL 3 BASIC19.97■□□□□ 0.79
PTCRAQ6ISU1 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC19.97■□□□□ 0.79
PTCRAQ6ISU1 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC19.97■□□□□ 0.79
PTCRAQ6ISU1 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.97■□□□□ 0.79
PTCRAQ6ISU1 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PTCRAQ6ISU1 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PTCRAQ6ISU1 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PTCRAQ6ISU1 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
PTCRAQ6ISU1 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PTCRAQ6ISU1 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PTCRAQ6ISU1 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PTCRAQ6ISU1 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PTCRAQ6ISU1 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC19.96■□□□□ 0.79
PTCRAQ6ISU1 FP700111.2-201ENST00000619190 1892 ntBASIC19.96■□□□□ 0.79
PTCRAQ6ISU1 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC19.96■□□□□ 0.79
PTCRAQ6ISU1 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.96■□□□□ 0.79
PTCRAQ6ISU1 AL162741.1-201ENST00000565563 1558 ntBASIC19.96■□□□□ 0.79
PTCRAQ6ISU1 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PTCRAQ6ISU1 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PTCRAQ6ISU1 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PTCRAQ6ISU1 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.96■□□□□ 0.79
PTCRAQ6ISU1 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PTCRAQ6ISU1 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
PTCRAQ6ISU1 AL590627.1-203ENST00000421194 1026 ntBASIC19.96■□□□□ 0.79
PTCRAQ6ISU1 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC19.96■□□□□ 0.79
PTCRAQ6ISU1 PMS2P1-201ENST00000431037 1228 ntBASIC19.96■□□□□ 0.79
PTCRAQ6ISU1 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC19.96■□□□□ 0.79
PTCRAQ6ISU1 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC19.96■□□□□ 0.79
PTCRAQ6ISU1 PENK-208ENST00000523051 772 ntTSL 5 BASIC19.96■□□□□ 0.79
PTCRAQ6ISU1 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.96■□□□□ 0.79
PTCRAQ6ISU1 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.96■□□□□ 0.79
PTCRAQ6ISU1 AL121912.1-201ENST00000603683 238 ntBASIC19.96■□□□□ 0.79
PTCRAQ6ISU1 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
PTCRAQ6ISU1 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PTCRAQ6ISU1 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC19.96■□□□□ 0.79
PTCRAQ6ISU1 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PTCRAQ6ISU1 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PTCRAQ6ISU1 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.96■□□□□ 0.79
PTCRAQ6ISU1 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
PTCRAQ6ISU1 AC093525.10-201ENST00000625130 1569 ntBASIC19.95■□□□□ 0.78
PTCRAQ6ISU1 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PTCRAQ6ISU1 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
PTCRAQ6ISU1 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
PTCRAQ6ISU1 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC19.95■□□□□ 0.78
PTCRAQ6ISU1 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PTCRAQ6ISU1 KRT8P11-201ENST00000409686 1436 ntBASIC19.95■□□□□ 0.78
PTCRAQ6ISU1 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PTCRAQ6ISU1 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC19.95■□□□□ 0.78
PTCRAQ6ISU1 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
PTCRAQ6ISU1 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PTCRAQ6ISU1 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
PTCRAQ6ISU1 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
PTCRAQ6ISU1 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PTCRAQ6ISU1 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.95■□□□□ 0.78
PTCRAQ6ISU1 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
PTCRAQ6ISU1 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC19.95■□□□□ 0.78
PTCRAQ6ISU1 TPSP2-201ENST00000561760 610 ntBASIC19.95■□□□□ 0.78
PTCRAQ6ISU1 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC19.95■□□□□ 0.78
PTCRAQ6ISU1 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
PTCRAQ6ISU1 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC19.95■□□□□ 0.78
PTCRAQ6ISU1 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PTCRAQ6ISU1 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
PTCRAQ6ISU1 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
PTCRAQ6ISU1 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PTCRAQ6ISU1 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.95■□□□□ 0.78
PTCRAQ6ISU1 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
PTCRAQ6ISU1 HLA-A-201ENST00000376802 1334 ntBASIC19.95■□□□□ 0.78
PTCRAQ6ISU1 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
PTCRAQ6ISU1 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PTCRAQ6ISU1 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PTCRAQ6ISU1 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PTCRAQ6ISU1 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.94■□□□□ 0.78
PTCRAQ6ISU1 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PTCRAQ6ISU1 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
PTCRAQ6ISU1 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
PTCRAQ6ISU1 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PTCRAQ6ISU1 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PTCRAQ6ISU1 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PTCRAQ6ISU1 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
PTCRAQ6ISU1 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PTCRAQ6ISU1 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC19.94■□□□□ 0.78
PTCRAQ6ISU1 DRAXINP1-201ENST00000437611 948 ntBASIC19.94■□□□□ 0.78
PTCRAQ6ISU1 AC012615.1-201ENST00000565797 1299 ntBASIC19.94■□□□□ 0.78
PTCRAQ6ISU1 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC19.94■□□□□ 0.78
PTCRAQ6ISU1 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PTCRAQ6ISU1 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.94■□□□□ 0.78
PTCRAQ6ISU1 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms