Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.06■□□□□ 0.48
HLA-DQA1Q5Y7H0 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC18.06■□□□□ 0.48
HLA-DQA1Q5Y7H0 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
HLA-DQA1Q5Y7H0 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HLA-DQA1Q5Y7H0 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HLA-DQA1Q5Y7H0 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18.06■□□□□ 0.48
HLA-DQA1Q5Y7H0 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
HLA-DQA1Q5Y7H0 MIR718-201ENST00000390190 70 ntBASIC18.06■□□□□ 0.48
HLA-DQA1Q5Y7H0 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HLA-DQA1Q5Y7H0 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC18.06■□□□□ 0.48
HLA-DQA1Q5Y7H0 C1QL1P1-201ENST00000568105 661 ntBASIC18.06■□□□□ 0.48
HLA-DQA1Q5Y7H0 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC18.06■□□□□ 0.48
HLA-DQA1Q5Y7H0 AP001412.1-201ENST00000608405 714 ntBASIC18.06■□□□□ 0.48
HLA-DQA1Q5Y7H0 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HLA-DQA1Q5Y7H0 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.06■□□□□ 0.48
HLA-DQA1Q5Y7H0 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HLA-DQA1Q5Y7H0 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.06■□□□□ 0.48
HLA-DQA1Q5Y7H0 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
HLA-DQA1Q5Y7H0 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
HLA-DQA1Q5Y7H0 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HLA-DQA1Q5Y7H0 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HLA-DQA1Q5Y7H0 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HLA-DQA1Q5Y7H0 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.06■□□□□ 0.48
HLA-DQA1Q5Y7H0 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
HLA-DQA1Q5Y7H0 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HLA-DQA1Q5Y7H0 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HLA-DQA1Q5Y7H0 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC18.06■□□□□ 0.48
HLA-DQA1Q5Y7H0 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HLA-DQA1Q5Y7H0 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.05■□□□□ 0.48
HLA-DQA1Q5Y7H0 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.05■□□□□ 0.48
HLA-DQA1Q5Y7H0 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HLA-DQA1Q5Y7H0 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC18.05■□□□□ 0.48
HLA-DQA1Q5Y7H0 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HLA-DQA1Q5Y7H0 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
HLA-DQA1Q5Y7H0 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.05■□□□□ 0.48
HLA-DQA1Q5Y7H0 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HLA-DQA1Q5Y7H0 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.05■□□□□ 0.48
HLA-DQA1Q5Y7H0 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HLA-DQA1Q5Y7H0 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HLA-DQA1Q5Y7H0 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HLA-DQA1Q5Y7H0 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
HLA-DQA1Q5Y7H0 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
HLA-DQA1Q5Y7H0 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.05■□□□□ 0.48
HLA-DQA1Q5Y7H0 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC18.05■□□□□ 0.48
HLA-DQA1Q5Y7H0 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HLA-DQA1Q5Y7H0 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC18.05■□□□□ 0.48
HLA-DQA1Q5Y7H0 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HLA-DQA1Q5Y7H0 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC18.05■□□□□ 0.48
HLA-DQA1Q5Y7H0 USP36-216ENST00000589424 970 ntTSL 5 BASIC18.05■□□□□ 0.48
HLA-DQA1Q5Y7H0 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HLA-DQA1Q5Y7H0 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC18.05■□□□□ 0.48
HLA-DQA1Q5Y7H0 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
HLA-DQA1Q5Y7H0 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC18.05■□□□□ 0.48
HLA-DQA1Q5Y7H0 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HLA-DQA1Q5Y7H0 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HLA-DQA1Q5Y7H0 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
HLA-DQA1Q5Y7H0 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
HLA-DQA1Q5Y7H0 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.04■□□□□ 0.48
HLA-DQA1Q5Y7H0 AC120498.9-201ENST00000339021 3867 ntBASIC18.04■□□□□ 0.48
HLA-DQA1Q5Y7H0 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HLA-DQA1Q5Y7H0 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HLA-DQA1Q5Y7H0 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
HLA-DQA1Q5Y7H0 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HLA-DQA1Q5Y7H0 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HLA-DQA1Q5Y7H0 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.04■□□□□ 0.48
HLA-DQA1Q5Y7H0 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.04■□□□□ 0.48
HLA-DQA1Q5Y7H0 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.04■□□□□ 0.48
HLA-DQA1Q5Y7H0 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC18.04■□□□□ 0.48
HLA-DQA1Q5Y7H0 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.04■□□□□ 0.48
HLA-DQA1Q5Y7H0 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HLA-DQA1Q5Y7H0 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
HLA-DQA1Q5Y7H0 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
HLA-DQA1Q5Y7H0 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
HLA-DQA1Q5Y7H0 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
HLA-DQA1Q5Y7H0 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
HLA-DQA1Q5Y7H0 AFG3L1P-217ENST00000557444 2447 ntBASIC18.03■□□□□ 0.48
HLA-DQA1Q5Y7H0 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HLA-DQA1Q5Y7H0 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HLA-DQA1Q5Y7H0 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.03■□□□□ 0.48
HLA-DQA1Q5Y7H0 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.03■□□□□ 0.48
HLA-DQA1Q5Y7H0 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HLA-DQA1Q5Y7H0 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HLA-DQA1Q5Y7H0 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.03■□□□□ 0.48
HLA-DQA1Q5Y7H0 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HLA-DQA1Q5Y7H0 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HLA-DQA1Q5Y7H0 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HLA-DQA1Q5Y7H0 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
HLA-DQA1Q5Y7H0 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
HLA-DQA1Q5Y7H0 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.03■□□□□ 0.48
HLA-DQA1Q5Y7H0 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HLA-DQA1Q5Y7H0 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HLA-DQA1Q5Y7H0 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC18.03■□□□□ 0.48
HLA-DQA1Q5Y7H0 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
HLA-DQA1Q5Y7H0 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HLA-DQA1Q5Y7H0 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HLA-DQA1Q5Y7H0 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC18.03■□□□□ 0.48
HLA-DQA1Q5Y7H0 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HLA-DQA1Q5Y7H0 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.03■□□□□ 0.48
HLA-DQA1Q5Y7H0 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HLA-DQA1Q5Y7H0 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms