Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
HIST1H1AQ02539 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC14.79□□□□□ -0.04
HIST1H1AQ02539 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC14.78□□□□□ -0.04
HIST1H1AQ02539 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
HIST1H1AQ02539 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC14.78□□□□□ -0.04
HIST1H1AQ02539 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC14.78□□□□□ -0.04
HIST1H1AQ02539 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HIST1H1AQ02539 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC14.78□□□□□ -0.04
HIST1H1AQ02539 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
HIST1H1AQ02539 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC14.78□□□□□ -0.04
HIST1H1AQ02539 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC14.78□□□□□ -0.04
HIST1H1AQ02539 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC14.78□□□□□ -0.04
HIST1H1AQ02539 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HIST1H1AQ02539 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HIST1H1AQ02539 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HIST1H1AQ02539 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC14.78□□□□□ -0.04
HIST1H1AQ02539 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
HIST1H1AQ02539 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HIST1H1AQ02539 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC14.78□□□□□ -0.04
HIST1H1AQ02539 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HIST1H1AQ02539 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HIST1H1AQ02539 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HIST1H1AQ02539 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HIST1H1AQ02539 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
HIST1H1AQ02539 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC14.78□□□□□ -0.04
HIST1H1AQ02539 BX276092.2-201ENST00000417668 665 ntBASIC14.78□□□□□ -0.04
HIST1H1AQ02539 AC026185.1-201ENST00000445748 174 ntBASIC14.78□□□□□ -0.04
HIST1H1AQ02539 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC14.78□□□□□ -0.04
HIST1H1AQ02539 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC14.78□□□□□ -0.04
HIST1H1AQ02539 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC14.78□□□□□ -0.04
HIST1H1AQ02539 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HIST1H1AQ02539 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HIST1H1AQ02539 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
HIST1H1AQ02539 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC14.78□□□□□ -0.04
HIST1H1AQ02539 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HIST1H1AQ02539 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC14.78□□□□□ -0.04
HIST1H1AQ02539 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC14.78□□□□□ -0.04
HIST1H1AQ02539 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC14.78□□□□□ -0.04
HIST1H1AQ02539 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC14.78□□□□□ -0.04
HIST1H1AQ02539 HR-201ENST00000312841 5351 ntTSL 5 BASIC14.78□□□□□ -0.04
HIST1H1AQ02539 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HIST1H1AQ02539 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC14.78□□□□□ -0.04
HIST1H1AQ02539 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
HIST1H1AQ02539 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC14.77□□□□□ -0.04
HIST1H1AQ02539 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC14.77□□□□□ -0.04
HIST1H1AQ02539 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC14.77□□□□□ -0.04
HIST1H1AQ02539 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC14.77□□□□□ -0.04
HIST1H1AQ02539 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
HIST1H1AQ02539 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
HIST1H1AQ02539 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC14.77□□□□□ -0.05
HIST1H1AQ02539 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC14.77□□□□□ -0.05
HIST1H1AQ02539 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
HIST1H1AQ02539 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
HIST1H1AQ02539 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
HIST1H1AQ02539 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC14.77□□□□□ -0.05
HIST1H1AQ02539 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
HIST1H1AQ02539 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
HIST1H1AQ02539 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
HIST1H1AQ02539 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
HIST1H1AQ02539 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
HIST1H1AQ02539 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
HIST1H1AQ02539 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC14.77□□□□□ -0.05
HIST1H1AQ02539 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
HIST1H1AQ02539 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
HIST1H1AQ02539 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
HIST1H1AQ02539 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
HIST1H1AQ02539 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.05
HIST1H1AQ02539 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC14.76□□□□□ -0.05
HIST1H1AQ02539 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
HIST1H1AQ02539 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC14.76□□□□□ -0.05
HIST1H1AQ02539 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC14.76□□□□□ -0.05
HIST1H1AQ02539 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
HIST1H1AQ02539 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
HIST1H1AQ02539 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
HIST1H1AQ02539 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
HIST1H1AQ02539 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
HIST1H1AQ02539 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
HIST1H1AQ02539 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
HIST1H1AQ02539 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
HIST1H1AQ02539 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
HIST1H1AQ02539 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
HIST1H1AQ02539 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
HIST1H1AQ02539 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
HIST1H1AQ02539 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
HIST1H1AQ02539 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
HIST1H1AQ02539 CDCA4P2-201ENST00000441182 718 ntBASIC14.76□□□□□ -0.05
HIST1H1AQ02539 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
HIST1H1AQ02539 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
HIST1H1AQ02539 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
HIST1H1AQ02539 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC14.76□□□□□ -0.05
HIST1H1AQ02539 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC14.76□□□□□ -0.05
HIST1H1AQ02539 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
HIST1H1AQ02539 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
HIST1H1AQ02539 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
HIST1H1AQ02539 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
HIST1H1AQ02539 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
HIST1H1AQ02539 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
HIST1H1AQ02539 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
HIST1H1AQ02539 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC14.75□□□□□ -0.05
HIST1H1AQ02539 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms