Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
UBA52P62987 AC091799.1-201ENST00000422823 811 ntBASIC16.64■□□□□ 0.25
UBA52P62987 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
UBA52P62987 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC16.64■□□□□ 0.25
UBA52P62987 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC16.64■□□□□ 0.25
UBA52P62987 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC16.64■□□□□ 0.25
UBA52P62987 CYP2T3P-201ENST00000601990 817 ntBASIC16.64■□□□□ 0.25
UBA52P62987 HLA-B-256ENST00000639848 1089 ntBASIC16.64■□□□□ 0.25
UBA52P62987 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC16.64■□□□□ 0.25
UBA52P62987 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC16.64■□□□□ 0.25
UBA52P62987 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
UBA52P62987 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
UBA52P62987 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
UBA52P62987 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
UBA52P62987 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
UBA52P62987 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
UBA52P62987 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC16.64■□□□□ 0.25
UBA52P62987 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
UBA52P62987 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
UBA52P62987 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
UBA52P62987 NARF-205ENST00000412079 1760 ntTSL 5 BASIC16.64■□□□□ 0.25
UBA52P62987 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
UBA52P62987 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC16.64■□□□□ 0.25
UBA52P62987 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBA52P62987 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBA52P62987 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBA52P62987 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBA52P62987 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC16.63■□□□□ 0.25
UBA52P62987 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBA52P62987 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBA52P62987 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.63■□□□□ 0.25
UBA52P62987 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC16.63■□□□□ 0.25
UBA52P62987 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC16.63■□□□□ 0.25
UBA52P62987 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBA52P62987 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
UBA52P62987 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
UBA52P62987 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBA52P62987 RHOD-202ENST00000532559 538 ntTSL 3 BASIC16.63■□□□□ 0.25
UBA52P62987 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBA52P62987 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC16.63■□□□□ 0.25
UBA52P62987 AL359736.2-201ENST00000621992 437 ntBASIC16.63■□□□□ 0.25
UBA52P62987 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
UBA52P62987 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC16.63■□□□□ 0.25
UBA52P62987 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBA52P62987 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBA52P62987 PWWP2AP1-201ENST00000429776 2273 ntBASIC16.63■□□□□ 0.25
UBA52P62987 MME-217ENST00000616757 1315 ntTSL 5 BASIC16.63■□□□□ 0.25
UBA52P62987 STX5-203ENST00000394690 1568 ntTSL 5 BASIC16.63■□□□□ 0.25
UBA52P62987 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC16.63■□□□□ 0.25
UBA52P62987 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBA52P62987 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC16.63■□□□□ 0.25
UBA52P62987 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBA52P62987 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBA52P62987 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBA52P62987 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
UBA52P62987 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
UBA52P62987 BCL2-203ENST00000589955 5011 ntBASIC16.62■□□□□ 0.25
UBA52P62987 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBA52P62987 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
UBA52P62987 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
UBA52P62987 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
UBA52P62987 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC16.62■□□□□ 0.25
UBA52P62987 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC16.62■□□□□ 0.25
UBA52P62987 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC16.62■□□□□ 0.25
UBA52P62987 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
UBA52P62987 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
UBA52P62987 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBA52P62987 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBA52P62987 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBA52P62987 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC16.62■□□□□ 0.25
UBA52P62987 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
UBA52P62987 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC16.62■□□□□ 0.25
UBA52P62987 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
UBA52P62987 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC16.62■□□□□ 0.25
UBA52P62987 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
UBA52P62987 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
UBA52P62987 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC16.62■□□□□ 0.25
UBA52P62987 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBA52P62987 AC008403.3-201ENST00000598924 454 ntBASIC16.62■□□□□ 0.25
UBA52P62987 AL589743.5-201ENST00000616611 1050 ntBASIC16.62■□□□□ 0.25
UBA52P62987 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC16.62■□□□□ 0.25
UBA52P62987 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC16.62■□□□□ 0.25
UBA52P62987 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
UBA52P62987 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBA52P62987 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBA52P62987 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC16.62■□□□□ 0.25
UBA52P62987 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBA52P62987 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBA52P62987 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBA52P62987 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBA52P62987 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBA52P62987 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBA52P62987 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
UBA52P62987 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
UBA52P62987 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
UBA52P62987 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
UBA52P62987 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBA52P62987 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
UBA52P62987 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
UBA52P62987 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms