Protein–RNA interactions for Protein: P56748

CLDN8, Claudin-8, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN8P56748 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC18.4■□□□□ 0.54
CLDN8P56748 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC18.4■□□□□ 0.54
CLDN8P56748 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.4■□□□□ 0.54
CLDN8P56748 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.4■□□□□ 0.54
CLDN8P56748 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLDN8P56748 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CLDN8P56748 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLDN8P56748 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLDN8P56748 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CLDN8P56748 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLDN8P56748 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLDN8P56748 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLDN8P56748 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLDN8P56748 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLDN8P56748 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLDN8P56748 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
CLDN8P56748 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLDN8P56748 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CLDN8P56748 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLDN8P56748 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CLDN8P56748 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
CLDN8P56748 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLDN8P56748 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLDN8P56748 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CLDN8P56748 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CLDN8P56748 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CLDN8P56748 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.39■□□□□ 0.53
CLDN8P56748 MAP2K4P1-201ENST00000438453 1195 ntBASIC18.39■□□□□ 0.53
CLDN8P56748 KRT18P16-201ENST00000510337 1294 ntBASIC18.39■□□□□ 0.53
CLDN8P56748 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.39■□□□□ 0.53
CLDN8P56748 AL121829.2-201ENST00000620908 328 ntBASIC18.39■□□□□ 0.53
CLDN8P56748 PFKL-212ENST00000628044 129 ntTSL 3 BASIC18.39■□□□□ 0.53
CLDN8P56748 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CLDN8P56748 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLDN8P56748 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLDN8P56748 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.39■□□□□ 0.53
CLDN8P56748 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CLDN8P56748 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLDN8P56748 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
CLDN8P56748 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
CLDN8P56748 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CLDN8P56748 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLDN8P56748 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CLDN8P56748 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLDN8P56748 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CLDN8P56748 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.38■□□□□ 0.53
CLDN8P56748 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.38■□□□□ 0.53
CLDN8P56748 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.38■□□□□ 0.53
CLDN8P56748 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.38■□□□□ 0.53
CLDN8P56748 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.38■□□□□ 0.53
CLDN8P56748 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC18.38■□□□□ 0.53
CLDN8P56748 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC18.38■□□□□ 0.53
CLDN8P56748 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC18.38■□□□□ 0.53
CLDN8P56748 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC18.38■□□□□ 0.53
CLDN8P56748 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18.38■□□□□ 0.53
CLDN8P56748 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CLDN8P56748 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLDN8P56748 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CLDN8P56748 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.38■□□□□ 0.53
CLDN8P56748 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLDN8P56748 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.38■□□□□ 0.53
CLDN8P56748 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLDN8P56748 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CLDN8P56748 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.38■□□□□ 0.53
CLDN8P56748 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLDN8P56748 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLDN8P56748 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLDN8P56748 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.37■□□□□ 0.53
CLDN8P56748 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.37■□□□□ 0.53
CLDN8P56748 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CLDN8P56748 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.37■□□□□ 0.53
CLDN8P56748 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CLDN8P56748 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.37■□□□□ 0.53
CLDN8P56748 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CLDN8P56748 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLDN8P56748 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.37■□□□□ 0.53
CLDN8P56748 MIR935-201ENST00000401179 91 ntBASIC18.37■□□□□ 0.53
CLDN8P56748 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CLDN8P56748 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC18.37■□□□□ 0.53
CLDN8P56748 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.37■□□□□ 0.53
CLDN8P56748 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.37■□□□□ 0.53
CLDN8P56748 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC18.37■□□□□ 0.53
CLDN8P56748 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.37■□□□□ 0.53
CLDN8P56748 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC18.37■□□□□ 0.53
CLDN8P56748 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLDN8P56748 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLDN8P56748 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CLDN8P56748 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLDN8P56748 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLDN8P56748 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLDN8P56748 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
CLDN8P56748 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CLDN8P56748 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLDN8P56748 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CLDN8P56748 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CLDN8P56748 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CLDN8P56748 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CLDN8P56748 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLDN8P56748 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLDN8P56748 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms