Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC14.44□□□□□ -0.1
CMC4P56277 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
CMC4P56277 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
CMC4P56277 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CMC4P56277 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CMC4P56277 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC14.44□□□□□ -0.1
CMC4P56277 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CMC4P56277 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CMC4P56277 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CMC4P56277 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
CMC4P56277 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
CMC4P56277 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC14.43□□□□□ -0.1
CMC4P56277 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CMC4P56277 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
CMC4P56277 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CMC4P56277 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CMC4P56277 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CMC4P56277 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CMC4P56277 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CMC4P56277 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CMC4P56277 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
CMC4P56277 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CMC4P56277 SAPCD2P4-201ENST00000424595 1171 ntBASIC14.43□□□□□ -0.1
CMC4P56277 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC14.43□□□□□ -0.1
CMC4P56277 FDX2-207ENST00000494368 584 ntTSL 4 BASIC14.43□□□□□ -0.1
CMC4P56277 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC14.43□□□□□ -0.1
CMC4P56277 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC14.43□□□□□ -0.1
CMC4P56277 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CMC4P56277 MIR4785-201ENST00000585005 73 ntBASIC14.43□□□□□ -0.1
CMC4P56277 CR392000.1-201ENST00000624770 1228 ntBASIC14.43□□□□□ -0.1
CMC4P56277 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CMC4P56277 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
CMC4P56277 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CMC4P56277 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC14.43□□□□□ -0.1
CMC4P56277 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC14.43□□□□□ -0.1
CMC4P56277 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
CMC4P56277 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
CMC4P56277 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CMC4P56277 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
CMC4P56277 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CMC4P56277 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CMC4P56277 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
CMC4P56277 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC14.42□□□□□ -0.1
CMC4P56277 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC14.42□□□□□ -0.1
CMC4P56277 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
CMC4P56277 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC14.42□□□□□ -0.1
CMC4P56277 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CMC4P56277 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
CMC4P56277 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
CMC4P56277 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CMC4P56277 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CMC4P56277 PPP1R14BP5-201ENST00000440334 435 ntBASIC14.42□□□□□ -0.1
CMC4P56277 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CMC4P56277 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC14.42□□□□□ -0.1
CMC4P56277 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CMC4P56277 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC14.42□□□□□ -0.1
CMC4P56277 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC14.42□□□□□ -0.1
CMC4P56277 CD177P1-201ENST00000606252 935 ntBASIC14.42□□□□□ -0.1
CMC4P56277 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC14.42□□□□□ -0.1
CMC4P56277 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CMC4P56277 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CMC4P56277 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC14.42□□□□□ -0.1
CMC4P56277 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CMC4P56277 FSCN1P1-201ENST00000568912 1481 ntBASIC14.42□□□□□ -0.1
CMC4P56277 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CMC4P56277 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CMC4P56277 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CMC4P56277 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
CMC4P56277 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
CMC4P56277 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
CMC4P56277 SRI-203ENST00000419179 1307 ntTSL 2 BASIC14.41□□□□□ -0.1
CMC4P56277 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC14.41□□□□□ -0.1
CMC4P56277 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
CMC4P56277 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CMC4P56277 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CMC4P56277 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CMC4P56277 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC14.41□□□□□ -0.1
CMC4P56277 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC14.41□□□□□ -0.1
CMC4P56277 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
CMC4P56277 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CMC4P56277 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
CMC4P56277 PTPA-216ENST00000432651 857 ntTSL 2 BASIC14.41□□□□□ -0.1
CMC4P56277 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC14.41□□□□□ -0.1
CMC4P56277 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC14.41□□□□□ -0.1
CMC4P56277 GRAMD4P8-201ENST00000605465 1115 ntBASIC14.41□□□□□ -0.1
CMC4P56277 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CMC4P56277 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CMC4P56277 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CMC4P56277 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CMC4P56277 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC14.41□□□□□ -0.1
CMC4P56277 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC14.41□□□□□ -0.1
CMC4P56277 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC14.41□□□□□ -0.1
CMC4P56277 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC14.41□□□□□ -0.1
CMC4P56277 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC14.41□□□□□ -0.1
CMC4P56277 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC14.41□□□□□ -0.1
CMC4P56277 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CMC4P56277 MED17-221ENST00000639724 2317 ntTSL 5 BASIC14.41□□□□□ -0.1
CMC4P56277 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CMC4P56277 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC14.41□□□□□ -0.1
CMC4P56277 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms