Protein–RNA interactions for Protein: P45973

CBX5, Chromobox protein homolog 5, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5P45973 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CBX5P45973 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.63■□□□□ 0.25
CBX5P45973 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CBX5P45973 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CBX5P45973 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CBX5P45973 AK1-201ENST00000223836 736 ntTSL 3 BASIC16.63■□□□□ 0.25
CBX5P45973 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CBX5P45973 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CBX5P45973 HLA-G-202ENST00000376815 851 ntBASIC16.63■□□□□ 0.25
CBX5P45973 HLA-G-203ENST00000376818 1127 ntBASIC16.63■□□□□ 0.25
CBX5P45973 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
CBX5P45973 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC16.63■□□□□ 0.25
CBX5P45973 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC16.63■□□□□ 0.25
CBX5P45973 AL591742.1-201ENST00000604433 565 ntBASIC16.63■□□□□ 0.25
CBX5P45973 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CBX5P45973 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
CBX5P45973 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CBX5P45973 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CBX5P45973 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
CBX5P45973 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
CBX5P45973 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
CBX5P45973 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
CBX5P45973 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CBX5P45973 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
CBX5P45973 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CBX5P45973 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CBX5P45973 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CBX5P45973 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC16.62■□□□□ 0.25
CBX5P45973 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CBX5P45973 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CBX5P45973 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CBX5P45973 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CBX5P45973 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
CBX5P45973 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC16.62■□□□□ 0.25
CBX5P45973 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CBX5P45973 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CBX5P45973 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CBX5P45973 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.62■□□□□ 0.25
CBX5P45973 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CBX5P45973 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CBX5P45973 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CBX5P45973 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CBX5P45973 PBX1-209ENST00000485769 834 ntTSL 2 BASIC16.62■□□□□ 0.25
CBX5P45973 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC16.62■□□□□ 0.25
CBX5P45973 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.62■□□□□ 0.25
CBX5P45973 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CBX5P45973 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CBX5P45973 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CBX5P45973 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CBX5P45973 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CBX5P45973 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CBX5P45973 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CBX5P45973 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CBX5P45973 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CBX5P45973 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CBX5P45973 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CBX5P45973 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CBX5P45973 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CBX5P45973 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CBX5P45973 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CBX5P45973 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CBX5P45973 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CBX5P45973 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC16.61■□□□□ 0.25
CBX5P45973 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CBX5P45973 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CBX5P45973 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CBX5P45973 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC16.61■□□□□ 0.25
CBX5P45973 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CBX5P45973 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CBX5P45973 NALT1-201ENST00000429224 738 ntTSL 5 BASIC16.61■□□□□ 0.25
CBX5P45973 AC142381.2-201ENST00000566120 298 ntBASIC16.61■□□□□ 0.25
CBX5P45973 AL162412.1-201ENST00000567129 965 ntBASIC16.61■□□□□ 0.25
CBX5P45973 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CBX5P45973 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC16.61■□□□□ 0.25
CBX5P45973 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC16.61■□□□□ 0.25
CBX5P45973 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC16.61■□□□□ 0.25
CBX5P45973 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CBX5P45973 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CBX5P45973 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CBX5P45973 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CBX5P45973 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CBX5P45973 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CBX5P45973 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CBX5P45973 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CBX5P45973 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CBX5P45973 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC16.61■□□□□ 0.25
CBX5P45973 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CBX5P45973 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CBX5P45973 AP000997.3-201ENST00000623333 2250 ntBASIC16.61■□□□□ 0.25
CBX5P45973 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CBX5P45973 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CBX5P45973 PHGDH-210ENST00000641115 1638 ntBASIC16.6■□□□□ 0.25
CBX5P45973 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
CBX5P45973 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
CBX5P45973 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CBX5P45973 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CBX5P45973 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC16.6■□□□□ 0.25
CBX5P45973 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CBX5P45973 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
CBX5P45973 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms