Protein–RNA interactions for Protein: P17600

SYN1, Synapsin-1, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYN1P17600 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC21.1■□□□□ 0.97
SYN1P17600 NME4-212ENST00000621774 904 ntTSL 3 BASIC21.1■□□□□ 0.97
SYN1P17600 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SYN1P17600 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
SYN1P17600 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SYN1P17600 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SYN1P17600 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC21.1■□□□□ 0.97
SYN1P17600 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC21.1■□□□□ 0.97
SYN1P17600 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SYN1P17600 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC21.1■□□□□ 0.97
SYN1P17600 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SYN1P17600 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC21.09■□□□□ 0.97
SYN1P17600 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
SYN1P17600 HLA-A-201ENST00000376802 1334 ntBASIC21.09■□□□□ 0.97
SYN1P17600 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC21.09■□□□□ 0.97
SYN1P17600 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SYN1P17600 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SYN1P17600 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC21.09■□□□□ 0.97
SYN1P17600 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC21.09■□□□□ 0.97
SYN1P17600 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SYN1P17600 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SYN1P17600 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SYN1P17600 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SYN1P17600 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SYN1P17600 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
SYN1P17600 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC21.09■□□□□ 0.97
SYN1P17600 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SYN1P17600 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SYN1P17600 KRT18P31-201ENST00000506277 1292 ntBASIC21.09■□□□□ 0.97
SYN1P17600 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC21.09■□□□□ 0.97
SYN1P17600 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC21.09■□□□□ 0.97
SYN1P17600 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC21.09■□□□□ 0.97
SYN1P17600 AF228730.7-201ENST00000641842 219 ntBASIC21.09■□□□□ 0.97
SYN1P17600 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SYN1P17600 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SYN1P17600 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SYN1P17600 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SYN1P17600 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
SYN1P17600 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
SYN1P17600 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SYN1P17600 Z98882.1-201ENST00000622160 2253 ntBASIC21.08■□□□□ 0.97
SYN1P17600 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SYN1P17600 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
SYN1P17600 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SYN1P17600 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SYN1P17600 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SYN1P17600 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SYN1P17600 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SYN1P17600 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC21.08■□□□□ 0.97
SYN1P17600 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC21.08■□□□□ 0.97
SYN1P17600 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC21.08■□□□□ 0.97
SYN1P17600 AC092183.1-201ENST00000469884 875 ntBASIC21.08■□□□□ 0.97
SYN1P17600 AC034232.1-201ENST00000506026 1064 ntBASIC21.08■□□□□ 0.97
SYN1P17600 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
SYN1P17600 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
SYN1P17600 BX640515.1-201ENST00000617215 977 ntBASIC21.08■□□□□ 0.97
SYN1P17600 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC21.08■□□□□ 0.97
SYN1P17600 FP700111.2-201ENST00000619190 1892 ntBASIC21.08■□□□□ 0.97
SYN1P17600 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
SYN1P17600 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.08■□□□□ 0.96
SYN1P17600 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
SYN1P17600 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SYN1P17600 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.07■□□□□ 0.96
SYN1P17600 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
SYN1P17600 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
SYN1P17600 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SYN1P17600 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SYN1P17600 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SYN1P17600 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SYN1P17600 BUB3-202ENST00000368859 667 ntTSL 3 BASIC21.07■□□□□ 0.96
SYN1P17600 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC21.07■□□□□ 0.96
SYN1P17600 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC21.07■□□□□ 0.96
SYN1P17600 BMF-207ENST00000559701 630 ntTSL 3 BASIC21.07■□□□□ 0.96
SYN1P17600 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
SYN1P17600 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
SYN1P17600 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
SYN1P17600 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC21.07■□□□□ 0.96
SYN1P17600 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
SYN1P17600 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SYN1P17600 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
SYN1P17600 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SYN1P17600 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SYN1P17600 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC21.06■□□□□ 0.96
SYN1P17600 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SYN1P17600 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC21.06■□□□□ 0.96
SYN1P17600 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
SYN1P17600 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
SYN1P17600 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC21.06■□□□□ 0.96
SYN1P17600 TSPY12P-201ENST00000421279 868 ntBASIC21.06■□□□□ 0.96
SYN1P17600 PMS2P1-201ENST00000431037 1228 ntBASIC21.06■□□□□ 0.96
SYN1P17600 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC21.06■□□□□ 0.96
SYN1P17600 PENK-208ENST00000523051 772 ntTSL 5 BASIC21.06■□□□□ 0.96
SYN1P17600 TPSP2-201ENST00000561760 610 ntBASIC21.06■□□□□ 0.96
SYN1P17600 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SYN1P17600 AL121912.1-201ENST00000603683 238 ntBASIC21.06■□□□□ 0.96
SYN1P17600 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SYN1P17600 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SYN1P17600 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SYN1P17600 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
SYN1P17600 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms