Protein–RNA interactions for Protein: Q9UPR3

SMG5, Protein SMG5, humanhuman

Known RBP Predictions only

Length 1,016 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5Q9UPR3 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SMG5Q9UPR3 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SMG5Q9UPR3 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
SMG5Q9UPR3 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
SMG5Q9UPR3 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
SMG5Q9UPR3 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SMG5Q9UPR3 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SMG5Q9UPR3 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC20.34■□□□□ 0.85
SMG5Q9UPR3 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20.34■□□□□ 0.85
SMG5Q9UPR3 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
SMG5Q9UPR3 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC20.34■□□□□ 0.85
SMG5Q9UPR3 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SMG5Q9UPR3 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.34■□□□□ 0.85
SMG5Q9UPR3 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SMG5Q9UPR3 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
SMG5Q9UPR3 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SMG5Q9UPR3 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.33■□□□□ 0.85
SMG5Q9UPR3 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.33■□□□□ 0.85
SMG5Q9UPR3 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.33■□□□□ 0.85
SMG5Q9UPR3 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SMG5Q9UPR3 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.33■□□□□ 0.85
SMG5Q9UPR3 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SMG5Q9UPR3 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SMG5Q9UPR3 AP000974.1-201ENST00000623909 2387 ntBASIC20.33■□□□□ 0.85
SMG5Q9UPR3 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
SMG5Q9UPR3 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
SMG5Q9UPR3 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SMG5Q9UPR3 FAM197Y1-201ENST00000421178 764 ntBASIC20.33■□□□□ 0.85
SMG5Q9UPR3 AL353807.1-201ENST00000427475 662 ntBASIC20.33■□□□□ 0.85
SMG5Q9UPR3 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
SMG5Q9UPR3 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC20.33■□□□□ 0.85
SMG5Q9UPR3 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
SMG5Q9UPR3 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.33■□□□□ 0.85
SMG5Q9UPR3 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC20.33■□□□□ 0.85
SMG5Q9UPR3 MIR2861-201ENST00000636310 90 ntBASIC20.33■□□□□ 0.85
SMG5Q9UPR3 TMEM179-206ENST00000616017 1645 ntBASIC20.33■□□□□ 0.84
SMG5Q9UPR3 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.84
SMG5Q9UPR3 KRT8P9-201ENST00000558927 1449 ntBASIC20.33■□□□□ 0.84
SMG5Q9UPR3 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SMG5Q9UPR3 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SMG5Q9UPR3 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
SMG5Q9UPR3 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
SMG5Q9UPR3 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
SMG5Q9UPR3 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SMG5Q9UPR3 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.32■□□□□ 0.84
SMG5Q9UPR3 TNXA-203ENST00000507684 2038 ntBASIC20.32■□□□□ 0.84
SMG5Q9UPR3 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.32■□□□□ 0.84
SMG5Q9UPR3 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SMG5Q9UPR3 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SMG5Q9UPR3 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.32■□□□□ 0.84
SMG5Q9UPR3 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SMG5Q9UPR3 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SMG5Q9UPR3 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
SMG5Q9UPR3 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
SMG5Q9UPR3 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.32■□□□□ 0.84
SMG5Q9UPR3 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.32■□□□□ 0.84
SMG5Q9UPR3 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
SMG5Q9UPR3 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
SMG5Q9UPR3 RBM17P1-201ENST00000453646 1190 ntBASIC20.32■□□□□ 0.84
SMG5Q9UPR3 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.32■□□□□ 0.84
SMG5Q9UPR3 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
SMG5Q9UPR3 NTF6B-201ENST00000591913 560 ntBASIC20.32■□□□□ 0.84
SMG5Q9UPR3 Six3os1_6.1-201ENST00000620790 196 ntBASIC20.32■□□□□ 0.84
SMG5Q9UPR3 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.32■□□□□ 0.84
SMG5Q9UPR3 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SMG5Q9UPR3 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SMG5Q9UPR3 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SMG5Q9UPR3 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.32■□□□□ 0.84
SMG5Q9UPR3 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SMG5Q9UPR3 LINC01568-207ENST00000641790 1380 ntBASIC20.32■□□□□ 0.84
SMG5Q9UPR3 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
SMG5Q9UPR3 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SMG5Q9UPR3 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
SMG5Q9UPR3 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC20.31■□□□□ 0.84
SMG5Q9UPR3 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC20.31■□□□□ 0.84
SMG5Q9UPR3 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
SMG5Q9UPR3 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
SMG5Q9UPR3 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.31■□□□□ 0.84
SMG5Q9UPR3 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.31■□□□□ 0.84
SMG5Q9UPR3 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SMG5Q9UPR3 AC087633.2-202ENST00000565166 1439 ntBASIC20.31■□□□□ 0.84
SMG5Q9UPR3 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC20.31■□□□□ 0.84
SMG5Q9UPR3 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SMG5Q9UPR3 AC087388.1-201ENST00000571370 1112 ntBASIC20.31■□□□□ 0.84
SMG5Q9UPR3 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC20.31■□□□□ 0.84
SMG5Q9UPR3 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC20.31■□□□□ 0.84
SMG5Q9UPR3 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC20.31■□□□□ 0.84
SMG5Q9UPR3 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC20.31■□□□□ 0.84
SMG5Q9UPR3 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
SMG5Q9UPR3 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
SMG5Q9UPR3 GLDC-219ENST00000640208 420 ntTSL 2 BASIC20.31■□□□□ 0.84
SMG5Q9UPR3 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SMG5Q9UPR3 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SMG5Q9UPR3 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC20.31■□□□□ 0.84
SMG5Q9UPR3 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.3■□□□□ 0.84
SMG5Q9UPR3 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC20.3■□□□□ 0.84
SMG5Q9UPR3 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
SMG5Q9UPR3 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SMG5Q9UPR3 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC20.3■□□□□ 0.84
SMG5Q9UPR3 TERF1P1-201ENST00000311003 1181 ntBASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms