Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
VRK3Q8IV63 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
VRK3Q8IV63 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
VRK3Q8IV63 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
VRK3Q8IV63 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
VRK3Q8IV63 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18.97■□□□□ 0.63
VRK3Q8IV63 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
VRK3Q8IV63 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC18.97■□□□□ 0.63
VRK3Q8IV63 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
VRK3Q8IV63 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC18.97■□□□□ 0.63
VRK3Q8IV63 RARRES2P10-201ENST00000564312 460 ntBASIC18.97■□□□□ 0.63
VRK3Q8IV63 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC18.97■□□□□ 0.63
VRK3Q8IV63 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC18.97■□□□□ 0.63
VRK3Q8IV63 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC18.97■□□□□ 0.63
VRK3Q8IV63 AL032819.2-201ENST00000624543 2162 ntBASIC18.97■□□□□ 0.63
VRK3Q8IV63 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
VRK3Q8IV63 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
VRK3Q8IV63 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.97■□□□□ 0.63
VRK3Q8IV63 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
VRK3Q8IV63 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.97■□□□□ 0.63
VRK3Q8IV63 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
VRK3Q8IV63 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
VRK3Q8IV63 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.96■□□□□ 0.63
VRK3Q8IV63 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
VRK3Q8IV63 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
VRK3Q8IV63 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.96■□□□□ 0.63
VRK3Q8IV63 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.96■□□□□ 0.63
VRK3Q8IV63 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
VRK3Q8IV63 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
VRK3Q8IV63 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
VRK3Q8IV63 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC18.96■□□□□ 0.63
VRK3Q8IV63 RPS2P4-201ENST00000476944 856 ntBASIC18.96■□□□□ 0.63
VRK3Q8IV63 AF186192.3-201ENST00000583427 947 ntBASIC18.96■□□□□ 0.63
VRK3Q8IV63 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
VRK3Q8IV63 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
VRK3Q8IV63 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
VRK3Q8IV63 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
VRK3Q8IV63 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
VRK3Q8IV63 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC18.96■□□□□ 0.63
VRK3Q8IV63 MME-217ENST00000616757 1315 ntTSL 5 BASIC18.96■□□□□ 0.63
VRK3Q8IV63 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.96■□□□□ 0.63
VRK3Q8IV63 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
VRK3Q8IV63 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
VRK3Q8IV63 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.95■□□□□ 0.62
VRK3Q8IV63 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.95■□□□□ 0.62
VRK3Q8IV63 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
VRK3Q8IV63 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC18.95■□□□□ 0.62
VRK3Q8IV63 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
VRK3Q8IV63 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
VRK3Q8IV63 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC18.95■□□□□ 0.62
VRK3Q8IV63 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
VRK3Q8IV63 NIFKP9-201ENST00000419265 221 ntBASIC18.95■□□□□ 0.62
VRK3Q8IV63 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC18.95■□□□□ 0.62
VRK3Q8IV63 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.95■□□□□ 0.62
VRK3Q8IV63 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC18.95■□□□□ 0.62
VRK3Q8IV63 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC18.95■□□□□ 0.62
VRK3Q8IV63 USP36-216ENST00000589424 970 ntTSL 5 BASIC18.95■□□□□ 0.62
VRK3Q8IV63 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC18.95■□□□□ 0.62
VRK3Q8IV63 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC18.95■□□□□ 0.62
VRK3Q8IV63 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
VRK3Q8IV63 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
VRK3Q8IV63 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.95■□□□□ 0.62
VRK3Q8IV63 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
VRK3Q8IV63 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
VRK3Q8IV63 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
VRK3Q8IV63 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
VRK3Q8IV63 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.95■□□□□ 0.62
VRK3Q8IV63 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
VRK3Q8IV63 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC18.94■□□□□ 0.62
VRK3Q8IV63 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
VRK3Q8IV63 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
VRK3Q8IV63 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.94■□□□□ 0.62
VRK3Q8IV63 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.94■□□□□ 0.62
VRK3Q8IV63 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
VRK3Q8IV63 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.94■□□□□ 0.62
VRK3Q8IV63 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
VRK3Q8IV63 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.94■□□□□ 0.62
VRK3Q8IV63 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
VRK3Q8IV63 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
VRK3Q8IV63 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
VRK3Q8IV63 REXO2-216ENST00000544196 452 ntTSL 3 BASIC18.94■□□□□ 0.62
VRK3Q8IV63 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.94■□□□□ 0.62
VRK3Q8IV63 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC18.94■□□□□ 0.62
VRK3Q8IV63 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
VRK3Q8IV63 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
VRK3Q8IV63 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
VRK3Q8IV63 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
VRK3Q8IV63 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.94■□□□□ 0.62
VRK3Q8IV63 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
VRK3Q8IV63 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.94■□□□□ 0.62
VRK3Q8IV63 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
VRK3Q8IV63 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
VRK3Q8IV63 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
VRK3Q8IV63 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
VRK3Q8IV63 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
VRK3Q8IV63 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
VRK3Q8IV63 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.93■□□□□ 0.62
VRK3Q8IV63 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
VRK3Q8IV63 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
VRK3Q8IV63 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms