Protein–RNA interactions for Protein: Q7KZF4

SND1, Staphylococcal nuclease domain-containing protein 1, humanhuman

Known RBP eCLIP

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1Q7KZF4 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.441e-8■■□□□ 13.6
SND1Q7KZF4 WARS-213ENST00000554084 866 ntTSL 58.39□□□□□ -1.074e-7■■□□□ 13.6
SND1Q7KZF4 GOT2-205ENST00000496461 981 ntTSL 214.17□□□□□ -0.145e-9■■□□□ 13.6
SND1Q7KZF4 GOT2-206ENST00000564400 983 ntTSL 311.91□□□□□ -0.55e-9■■□□□ 13.6
SND1Q7KZF4 YIPF3-204ENST00000455768 843 ntTSL 520.88■□□□□ 0.936e-12■■□□□ 13.6
SND1Q7KZF4 YIPF3-205ENST00000460547 1674 ntTSL 1 (best)18.02■□□□□ 0.476e-12■■□□□ 13.6
SND1Q7KZF4 YIPF3-203ENST00000416380 1005 ntTSL 513.1□□□□□ -0.316e-12■■□□□ 13.6
SND1Q7KZF4 YIPF3-216ENST00000512713 306 ntTSL 29.5□□□□□ -0.896e-12■■□□□ 13.6
SND1Q7KZF4 A2M-211ENST00000543436 600 ntTSL 511.75□□□□□ -0.531e-76■■□□□ 13.6
SND1Q7KZF4 ERGIC3-210ENST00000451605 520 ntTSL 29.97□□□□□ -0.813e-8■■□□□ 13.6
SND1Q7KZF4 HIST1H4E-201ENST00000615164 1487 ntAPPRIS P1 BASIC7.99□□□□□ -1.133e-26■■□□□ 13.6
SND1Q7KZF4 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC15.14■□□□□ 0.011e-12■■□□□ 13.6
SND1Q7KZF4 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.421e-9■■□□□ 13.6
SND1Q7KZF4 CDK1-203ENST00000395284 1913 ntAPPRIS P2 TSL 1 (best) BASIC8.64□□□□□ -1.031e-9■■□□□ 13.6
SND1Q7KZF4 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC7.36□□□□□ -1.231e-9■■□□□ 13.6
SND1Q7KZF4 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC5.09□□□□□ -1.61e-9■■□□□ 13.6
SND1Q7KZF4 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC5.06□□□□□ -1.61e-9■■□□□ 13.6
SND1Q7KZF4 ATRAID-204ENST00000472515 561 ntTSL 25.22□□□□□ -1.575e-8■■□□□ 13.6
SND1Q7KZF4 PERP-201ENST00000421351 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.093e-12■■□□□ 13.6
SND1Q7KZF4 CALU-204ENST00000493278 589 ntTSL 35.27□□□□□ -1.576e-14■■□□□ 13.6
SND1Q7KZF4 JUP-202ENST00000393930 3298 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.22e-6■■□□□ 13.6
SND1Q7KZF4 JUP-201ENST00000310706 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.392e-6■■□□□ 13.6
SND1Q7KZF4 JUP-203ENST00000393931 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.442e-6■■□□□ 13.6
SND1Q7KZF4 CEACAM1-202ENST00000344391 1619 ntTSL 1 (best)16.99■□□□□ 0.314e-9■■□□□ 13.6
SND1Q7KZF4 CEACAM1-205ENST00000377806 1773 ntTSL 1 (best)13.07□□□□□ -0.324e-9■■□□□ 13.6
SND1Q7KZF4 PROC-205ENST00000427769 598 ntTSL 412.28□□□□□ -0.441e-14■■□□□ 13.6
SND1Q7KZF4 PROC-210ENST00000474030 501 ntTSL 411.41□□□□□ -0.581e-14■■□□□ 13.6
SND1Q7KZF4 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.281e-8■■□□□ 13.6
SND1Q7KZF4 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.241e-8■■□□□ 13.6
SND1Q7KZF4 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.041e-8■■□□□ 13.6
SND1Q7KZF4 TGOLN2-206ENST00000444342 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.161e-8■■□□□ 13.6
SND1Q7KZF4 TGOLN2-202ENST00000377386 6489 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.371e-8■■□□□ 13.6
SND1Q7KZF4 TGOLN2-201ENST00000282120 6419 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.671e-8■■□□□ 13.6
SND1Q7KZF4 MARCH6-211ENST00000512449 832 ntTSL 516.5■□□□□ 0.233e-7■■□□□ 13.6
SND1Q7KZF4 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.153e-7■■□□□ 13.6
SND1Q7KZF4 CCT7-209ENST00000473197 595 ntTSL 417.2■□□□□ 0.345e-14■■□□□ 13.6
SND1Q7KZF4 ERGIC3-208ENST00000442139 472 ntTSL 312.99□□□□□ -0.333e-8■■□□□ 13.6
SND1Q7KZF4 PRKCSH-207ENST00000588269 557 ntTSL 512.2□□□□□ -0.461e-29■■□□□ 13.6
SND1Q7KZF4 TGFBI-215ENST00000604555 1173 ntTSL 215.41■□□□□ 0.063e-10■■□□□ 13.5
SND1Q7KZF4 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC18.05■□□□□ 0.482e-6■■□□□ 13.5
SND1Q7KZF4 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC15.1■□□□□ 0.012e-6■■□□□ 13.5
SND1Q7KZF4 PSME1-207ENST00000560420 922 ntTSL 215.1■□□□□ 0.012e-6■■□□□ 13.5
SND1Q7KZF4 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.032e-6■■□□□ 13.5
SND1Q7KZF4 PSME1-209ENST00000561142 865 ntTSL 513.8□□□□□ -0.22e-6■■□□□ 13.5
SND1Q7KZF4 PSME1-210ENST00000561435 945 ntTSL 2 BASIC11.67□□□□□ -0.542e-6■■□□□ 13.5
SND1Q7KZF4 PSME1-206ENST00000559741 763 ntTSL 310.38□□□□□ -0.752e-6■■□□□ 13.5
SND1Q7KZF4 PSME1-204ENST00000558112 651 ntTSL 59.62□□□□□ -0.872e-6■■□□□ 13.5
SND1Q7KZF4 HSP90AA1-206ENST00000556554 552 ntTSL 29.19□□□□□ -0.945e-20■■□□□ 13.5
SND1Q7KZF4 PTPRC-204ENST00000367379 517 ntTSL 58.61□□□□□ -1.031e-7■■□□□ 13.5
SND1Q7KZF4 YIPF3-201ENST00000372417 406 ntTSL 28.26□□□□□ -1.096e-12■■□□□ 13.5
SND1Q7KZF4 GGCX-210ENST00000496962 684 ntTSL 213.65□□□□□ -0.221e-9■■□□□ 13.5
SND1Q7KZF4 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.625e-7■■□□□ 13.5
SND1Q7KZF4 SLC7A2-206ENST00000640220 2068 ntTSL 1 (best)11.42□□□□□ -0.585e-7■■□□□ 13.5
SND1Q7KZF4 SLC7A2-201ENST00000004531 7560 ntTSL 1 (best) BASIC10.16□□□□□ -0.785e-7■■□□□ 13.5
SND1Q7KZF4 SLC7A2-202ENST00000398090 7557 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.795e-7■■□□□ 13.5
SND1Q7KZF4 SLC7A2-204ENST00000494857 7622 ntAPPRIS ALT1 TSL 5 BASIC9.25□□□□□ -0.935e-7■■□□□ 13.5
SND1Q7KZF4 SLC7A2-203ENST00000470360 7638 ntAPPRIS P3 TSL 5 BASIC9.12□□□□□ -0.955e-7■■□□□ 13.5
SND1Q7KZF4 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.66■□□□□ 0.582e-7■■□□□ 13.5
SND1Q7KZF4 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.362e-7■■□□□ 13.5
SND1Q7KZF4 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.252e-7■■□□□ 13.5
SND1Q7KZF4 OCIAD1-226ENST00000513391 1288 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.462e-7■■□□□ 13.5
SND1Q7KZF4 OCIAD1-205ENST00000444354 1756 ntTSL 3 BASIC11.74□□□□□ -0.532e-7■■□□□ 13.5
SND1Q7KZF4 OCIAD1-203ENST00000396448 1306 ntTSL 1 (best) BASIC11.73□□□□□ -0.532e-7■■□□□ 13.5
SND1Q7KZF4 OCIAD1-201ENST00000264312 1414 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.622e-7■■□□□ 13.5
SND1Q7KZF4 OCIAD1-210ENST00000506801 571 ntTSL 2 BASIC9.63□□□□□ -0.872e-7■■□□□ 13.5
SND1Q7KZF4 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC8.74□□□□□ -1.012e-7■■□□□ 13.5
SND1Q7KZF4 OCIAD1-207ENST00000503016 720 ntTSL 34.98□□□□□ -1.612e-7■■□□□ 13.5
SND1Q7KZF4 HSPG2-205ENST00000427897 589 ntTSL 521.42■■□□□ 1.021e-12■■□□□ 13.5
SND1Q7KZF4 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC8.65□□□□□ -1.022e-6■■□□□ 13.5
SND1Q7KZF4 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.322e-6■■□□□ 13.5
SND1Q7KZF4 COPB1-205ENST00000526527 438 ntTSL 25.16□□□□□ -1.587e-7■■□□□ 13.5
SND1Q7KZF4 SYVN1-207ENST00000526121 578 ntTSL 310.34□□□□□ -0.753e-16■■□□□ 13.5
SND1Q7KZF4 FGG-210ENST00000473393 996 ntTSL 28.64□□□□□ -1.032e-33■■□□□ 13.5
SND1Q7KZF4 FGG-208ENST00000465336 722 ntTSL 26.59□□□□□ -1.352e-33■■□□□ 13.5
SND1Q7KZF4 GLB1-212ENST00000467571 517 ntTSL 39.68□□□□□ -0.865e-10■■□□□ 13.5
SND1Q7KZF4 AARS-203ENST00000565361 839 ntTSL 512.42□□□□□ -0.424e-10■■□□□ 13.5
SND1Q7KZF4 CPD-204ENST00000580396 2733 ntTSL 510.57□□□□□ -0.723e-8■■□□□ 13.5
SND1Q7KZF4 WARS-230ENST00000556504 847 ntTSL 510.78□□□□□ -0.683e-7■■□□□ 13.5
SND1Q7KZF4 WARS-205ENST00000553395 801 ntTSL 58.85□□□□□ -0.993e-7■■□□□ 13.5
SND1Q7KZF4 PIGS-209ENST00000577620 608 ntTSL 411.83□□□□□ -0.521e-8■■□□□ 13.5
SND1Q7KZF4 PIGS-204ENST00000465444 578 ntTSL 511.83□□□□□ -0.521e-8■■□□□ 13.5
SND1Q7KZF4 PIGS-211ENST00000582615 699 ntTSL 211.28□□□□□ -0.61e-8■■□□□ 13.5
SND1Q7KZF4 PIGS-210ENST00000580968 372 ntTSL 310.78□□□□□ -0.681e-8■■□□□ 13.5
SND1Q7KZF4 NCEH1-203ENST00000470419 587 ntTSL 27.17□□□□□ -1.262e-9■■□□□ 13.5
SND1Q7KZF4 ATF6-201ENST00000367942 7496 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.11e-7■■□□□ 13.5
SND1Q7KZF4 ERAP1-205ENST00000507154 583 ntTSL 324.16■■□□□ 1.462e-9■■□□□ 13.5
SND1Q7KZF4 TKT-206ENST00000460343 7286 ntTSL 212.79□□□□□ -0.361e-11■■□□□ 13.5
SND1Q7KZF4 EMC3-202ENST00000429759 751 ntTSL 3 BASIC9.88□□□□□ -0.835e-12■■□□□ 13.5
SND1Q7KZF4 LAMA5-212ENST00000495695 780 ntTSL 220.61■□□□□ 0.891e-10■■□□□ 13.5
SND1Q7KZF4 CANX-217ENST00000513246 727 ntTSL 518.69■□□□□ 0.584e-15■■□□□ 13.5
SND1Q7KZF4 CANX-207ENST00000503303 345 ntTSL 58.21□□□□□ -1.17e-13■■□□□ 13.5
SND1Q7KZF4 GAA-205ENST00000572080 723 ntTSL 317.29■□□□□ 0.365e-9■■□□□ 13.5
SND1Q7KZF4 CD81-206ENST00000481386 898 ntTSL 219.34■□□□□ 0.694e-13■■□□□ 13.4
SND1Q7KZF4 FREM1-202ENST00000380880 7324 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.731e-7■■□□□ 13.4
SND1Q7KZF4 FREM1-201ENST00000380875 6126 ntTSL 1 (best)10.32□□□□□ -0.761e-7■■□□□ 13.4
SND1Q7KZF4 FREM1-204ENST00000422223 10086 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.831e-7■■□□□ 13.4
SND1Q7KZF4 ARL6IP6-205ENST00000495469 1308 ntTSL 221.59■■□□□ 1.055e-9■■□□□ 13.4
SND1Q7KZF4 SLC52A2-213ENST00000534725 935 ntTSL 221.16■□□□□ 0.984e-8■■□□□ 13.4
SND1Q7KZF4 CA8-202ENST00000524872 1825 ntTSL 1 (best)19.28■□□□□ 0.685e-9■■□□□ 13.4
SND1Q7KZF4 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.585e-9■■□□□ 13.4
Retrieved 100 of 13,567 protein–RNA pairs in 140.4 ms