RNA–Protein interactions for RNA: ENST00000377806.7

CEACAM1-205, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CEACAM1, Length 1,773 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-205ENST00000377806 NISCHQ9Y2I1 1504 aa27■■□□□ 1.91
CEACAM1-205ENST00000377806 CCDC180Q9P1Z9 1646 aa23.33■■□□□ 1.33
CEACAM1-205ENST00000377806 ABCC9O60706 1549 aa22.78■■□□□ 1.24
CEACAM1-205ENST00000377806 ZCCHC6Q5VYS8 1495 aaKnown RBP22.78■■□□□ 1.24
CEACAM1-205ENST00000377806 DCAF1Q9Y4B6 1507 aa22.33■■□□□ 1.16
CEACAM1-205ENST00000377806 SHROOM4Q9ULL8 1493 aa22.25■■□□□ 1.15
CEACAM1-205ENST00000377806 DCAF8L2P0C7V8 631 aa22.06■■□□□ 1.12
CEACAM1-205ENST00000377806 MYT1Q01538 1121 aa22.03■■□□□ 1.12
CEACAM1-205ENST00000377806 PELP1Q8IZL8 1130 aaKnown RBP21.97■■□□□ 1.11
CEACAM1-205ENST00000377806 MYO15BQ96JP2 1530 aa21.93■■□□□ 1.1
CEACAM1-205ENST00000377806 RB1CC1Q8TDY2 1594 aa21.85■■□□□ 1.09
CEACAM1-205ENST00000377806 NACADO15069 1562 aa21.82■■□□□ 1.08
CEACAM1-205ENST00000377806 SUPT5HO00267 1087 aaKnown RBP21.56■■□□□ 1.04
CEACAM1-205ENST00000377806 UNC13AQ9UPW8 1703 aa21.53■■□□□ 1.04
CEACAM1-205ENST00000377806 SCRIBQ14160 1630 aa21.52■■□□□ 1.04
CEACAM1-205ENST00000377806 TTBK1Q5TCY1 1321 aaPredicted RBP21.5■■□□□ 1.03
CEACAM1-205ENST00000377806 PABPN1Q86U42 306 aaKnown RBP eCLIP21.3■■□□□ 1
CEACAM1-205ENST00000377806 BICRAQ9NZM4 1560 aa21.28■■□□□ 1
CEACAM1-205ENST00000377806 RSF1Q96T23 1441 aaPredicted RBP21.11■□□□□ 0.97
CEACAM1-205ENST00000377806 CECR2Q9BXF3 1484 aa20.99■□□□□ 0.95
CEACAM1-205ENST00000377806 MROH2BQ7Z745 1585 aa20.9■□□□□ 0.94
CEACAM1-205ENST00000377806 CHIC1Q5VXU3 224 aa20.89■□□□□ 0.93
CEACAM1-205ENST00000377806 DNAJC5BQ9UF47 199 aa20.84■□□□□ 0.93
CEACAM1-205ENST00000377806 BAZ1AQ9NRL2 1556 aaPredicted RBP20.78■□□□□ 0.92
CEACAM1-205ENST00000377806 SLC24A1O60721 1099 aa20.77■□□□□ 0.91
CEACAM1-205ENST00000377806 WIZO95785 1651 aa20.73■□□□□ 0.91
CEACAM1-205ENST00000377806 EIF4G1Q04637 1599 aaKnown RBP20.68■□□□□ 0.9
CEACAM1-205ENST00000377806 SMARCA4P51532 1647 aa20.67■□□□□ 0.9
CEACAM1-205ENST00000377806 CC2D2AQ9P2K1 1620 aa20.59■□□□□ 0.89
CEACAM1-205ENST00000377806 TOP2AP11388 1531 aaKnown RBP20.51■□□□□ 0.87
CEACAM1-205ENST00000377806 PEG3Q9GZU2 1588 aa20.42■□□□□ 0.86
CEACAM1-205ENST00000377806 SMARCA2P51531 1590 aa20.35■□□□□ 0.85
CEACAM1-205ENST00000377806 ERICH6Q7L0X2 663 aa20.34■□□□□ 0.85
CEACAM1-205ENST00000377806 CCDC88BA6NC98 1476 aa20.32■□□□□ 0.84
CEACAM1-205ENST00000377806 ATAD2BQ9ULI0 1458 aa20.25■□□□□ 0.83
CEACAM1-205ENST00000377806 TRIM41Q8WV44 630 aa20.23■□□□□ 0.83
CEACAM1-205ENST00000377806 APLP2Q06481 763 aa20.17■□□□□ 0.82
CEACAM1-205ENST00000377806 NCAPD3P42695 1498 aa20.13■□□□□ 0.81
CEACAM1-205ENST00000377806 BAZ1BQ9UIG0 1483 aaKnown RBP20.11■□□□□ 0.81
CEACAM1-205ENST00000377806 LOC105371045A0A1W2PR82 267 aa20.1■□□□□ 0.81
CEACAM1-205ENST00000377806 PRKCSHP14314 528 aaPredicted RBP20.07■□□□□ 0.8
CEACAM1-205ENST00000377806 HMGXB3Q12766 1538 aa20.06■□□□□ 0.8
CEACAM1-205ENST00000377806 ABCC8Q09428 1581 aa20.01■□□□□ 0.79
CEACAM1-205ENST00000377806 FAM9AQ8IZU1 332 aaPredicted RBP19.88■□□□□ 0.77
CEACAM1-205ENST00000377806 DAXXQ9UER7 740 aaPredicted RBP19.84■□□□□ 0.77
CEACAM1-205ENST00000377806 WRNQ14191 1432 aaPredicted RBP eCLIP19.81■□□□□ 0.76
CEACAM1-205ENST00000377806 NESP48681 1621 aa19.77■□□□□ 0.76
CEACAM1-205ENST00000377806 SYNJ1O43426 1573 aa19.75■□□□□ 0.75
CEACAM1-205ENST00000377806 SOGA1O94964 1423 aa19.72■□□□□ 0.75
CEACAM1-205ENST00000377806 EEA1Q15075 1411 aa19.7■□□□□ 0.74
CEACAM1-205ENST00000377806 CFTRP13569 1480 aa19.67■□□□□ 0.74
CEACAM1-205ENST00000377806 RUSC2Q8N2Y8 1516 aa19.65■□□□□ 0.74
CEACAM1-205ENST00000377806 TOP2BQ02880 1626 aa19.62■□□□□ 0.73
CEACAM1-205ENST00000377806 LAMC3Q9Y6N6 1575 aa19.61■□□□□ 0.73
CEACAM1-205ENST00000377806 BIVM-ERCC5R4GMW8 1640 aa19.6■□□□□ 0.73
CEACAM1-205ENST00000377806 EHMT2Q96KQ7 1210 aa19.57■□□□□ 0.72
CEACAM1-205ENST00000377806 CSRNP3Q8WYN3 585 aa19.56■□□□□ 0.72
CEACAM1-205ENST00000377806 ERCC6Q03468 1493 aa19.56■□□□□ 0.72
CEACAM1-205ENST00000377806 KIF21AQ7Z4S6 1674 aa19.56■□□□□ 0.72
CEACAM1-205ENST00000377806 CADPSQ9ULU8 1353 aa19.56■□□□□ 0.72
CEACAM1-205ENST00000377806 PRDM2Q13029 1718 aa19.54■□□□□ 0.72
CEACAM1-205ENST00000377806 CUX1P39880 1505 aa19.51■□□□□ 0.71
CEACAM1-205ENST00000377806 PCGF6Q9BYE7 350 aa19.51■□□□□ 0.71
CEACAM1-205ENST00000377806 TNIKQ9UKE5 1360 aa19.48■□□□□ 0.71
CEACAM1-205ENST00000377806 KIF21BO75037 1637 aa19.46■□□□□ 0.71
CEACAM1-205ENST00000377806 GOLGA3Q08378 1498 aa19.45■□□□□ 0.7
CEACAM1-205ENST00000377806 PDS5BQ9NTI5 1447 aa19.43■□□□□ 0.7
CEACAM1-205ENST00000377806 TRIM26Q12899 539 aaPredicted RBP19.42■□□□□ 0.7
CEACAM1-205ENST00000377806 THOC2Q8NI27 1593 aaKnown RBP19.42■□□□□ 0.7
CEACAM1-205ENST00000377806 CEP164Q9UPV0 1460 aa19.42■□□□□ 0.7
CEACAM1-205ENST00000377806 CEP162Q5TB80 1403 aa19.4■□□□□ 0.7
CEACAM1-205ENST00000377806 FANCD2Q9BXW9 1451 aa19.38■□□□□ 0.69
CEACAM1-205ENST00000377806 RAPGEF2Q9Y4G8 1499 aa19.3■□□□□ 0.68
CEACAM1-205ENST00000377806 HRCP23327 699 aa19.29■□□□□ 0.68
CEACAM1-205ENST00000377806 UBTFP17480 764 aaKnown RBP19.29■□□□□ 0.68
CEACAM1-205ENST00000377806 PRXQ9BXM0 1461 aa19.29■□□□□ 0.68
CEACAM1-205ENST00000377806 MRC2Q9UBG0 1479 aa19.28■□□□□ 0.68
CEACAM1-205ENST00000377806 KIF27Q86VH2 1401 aa19.26■□□□□ 0.67
CEACAM1-205ENST00000377806 ERICH3Q5RHP9 1530 aa19.25■□□□□ 0.67
CEACAM1-205ENST00000377806 CUX2O14529 1486 aa19.25■□□□□ 0.67
CEACAM1-205ENST00000377806 WDR62O43379 1518 aa19.23■□□□□ 0.67
CEACAM1-205ENST00000377806 URB2Q14146 1524 aaKnown RBP19.23■□□□□ 0.67
CEACAM1-205ENST00000377806 BCL11AQ9H165 835 aa19.22■□□□□ 0.67
CEACAM1-205ENST00000377806 FGD5Q6ZNL6 1462 aa19.21■□□□□ 0.67
CEACAM1-205ENST00000377806 DNMBPQ6XZF7 1577 aa19.18■□□□□ 0.66
CEACAM1-205ENST00000377806 CLIP1P30622 1438 aa19.15■□□□□ 0.66
CEACAM1-205ENST00000377806 TOPBP1Q92547 1522 aa19.13■□□□□ 0.65
CEACAM1-205ENST00000377806 IGF1RP08069 1367 aa19.1■□□□□ 0.65
CEACAM1-205ENST00000377806 PPARGC1BQ86YN6 1023 aaKnown RBP19.09■□□□□ 0.65
CEACAM1-205ENST00000377806 POLA1P09884 1462 aaPredicted RBP19.07■□□□□ 0.64
CEACAM1-205ENST00000377806 VPS8Q8N3P4 1428 aa19.06■□□□□ 0.64
CEACAM1-205ENST00000377806 ABCA10Q8WWZ4 1543 aa19.06■□□□□ 0.64
CEACAM1-205ENST00000377806 RAD54L2Q9Y4B4 1467 aa19.02■□□□□ 0.64
CEACAM1-205ENST00000377806 ARAP1Q96P48 1450 aa18.98■□□□□ 0.63
CEACAM1-205ENST00000377806 WDR97A6NE52 1622 aa18.98■□□□□ 0.63
CEACAM1-205ENST00000377806 CARMIL1Q5VZK9 1371 aa18.97■□□□□ 0.63
CEACAM1-205ENST00000377806 ZNF608Q9ULD9 1512 aaPredicted RBP18.92■□□□□ 0.62
CEACAM1-205ENST00000377806 TARBP1Q13395 1621 aaKnown RBP18.91■□□□□ 0.62
CEACAM1-205ENST00000377806 ARHGAP35Q9NRY4 1499 aa18.89■□□□□ 0.62
CEACAM1-205ENST00000377806 IFT140Q96RY7 1462 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms