RNA–Protein interactions for RNA: ENST00000580396.1

CPD-204, Transcript of carboxypeptidase D, humanhuman

TSL 5

Gene CPD, Length 2,733 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPD-204ENST00000580396 NISCHQ9Y2I1 1504 aa18.77■□□□□ 0.6
CPD-204ENST00000580396 CCDC180Q9P1Z9 1646 aa17.24■□□□□ 0.35
CPD-204ENST00000580396 DNAJC5Q9H3Z4 198 aa16.8■□□□□ 0.28
CPD-204ENST00000580396 SHROOM4Q9ULL8 1493 aa16.78■□□□□ 0.28
CPD-204ENST00000580396 ABCC9O60706 1549 aa16.64■□□□□ 0.25
CPD-204ENST00000580396 SLC24A1O60721 1099 aa16.56■□□□□ 0.24
CPD-204ENST00000580396 RB1CC1Q8TDY2 1594 aa16.51■□□□□ 0.23
CPD-204ENST00000580396 CHIC1Q5VXU3 224 aa16.47■□□□□ 0.23
CPD-204ENST00000580396 DNAJC5BQ9UF47 199 aa16.38■□□□□ 0.21
CPD-204ENST00000580396 NACADO15069 1562 aa16.3■□□□□ 0.2
CPD-204ENST00000580396 MYO15BQ96JP2 1530 aa16.28■□□□□ 0.2
CPD-204ENST00000580396 CUX2O14529 1486 aa16.19■□□□□ 0.18
CPD-204ENST00000580396 EHMT2Q96KQ7 1210 aa15.99■□□□□ 0.15
CPD-204ENST00000580396 ZCCHC6Q5VYS8 1495 aaKnown RBP15.93■□□□□ 0.14
CPD-204ENST00000580396 UNC13AQ9UPW8 1703 aa15.86■□□□□ 0.13
CPD-204ENST00000580396 BICRAQ9NZM4 1560 aa15.76■□□□□ 0.11
CPD-204ENST00000580396 SUPT5HO00267 1087 aaKnown RBP15.66■□□□□ 0.1
CPD-204ENST00000580396 AEBP2Q6ZN18 517 aaPredicted RBP15.64■□□□□ 0.09
CPD-204ENST00000580396 CC2D2AQ9P2K1 1620 aa15.62■□□□□ 0.09
CPD-204ENST00000580396 CECR2Q9BXF3 1484 aa15.61■□□□□ 0.09
CPD-204ENST00000580396 DCAF1Q9Y4B6 1507 aa15.5■□□□□ 0.07
CPD-204ENST00000580396 PLPPR3Q6T4P5 718 aa15.45■□□□□ 0.06
CPD-204ENST00000580396 EIF4G1Q04637 1599 aaKnown RBP15.42■□□□□ 0.06
CPD-204ENST00000580396 DCAF8L2P0C7V8 631 aa15.27■□□□□ 0.04
CPD-204ENST00000580396 RTN4Q9NQC3 1192 aaKnown RBP15.23■□□□□ 0.03
CPD-204ENST00000580396 HRCP23327 699 aa15.17■□□□□ 0.02
CPD-204ENST00000580396 THOC2Q8NI27 1593 aaKnown RBP15.01□□□□□ -0.01
CPD-204ENST00000580396 PHF23Q9BUL5 403 aaPredicted RBP15.01□□□□□ -0.01
CPD-204ENST00000580396 PCGF6Q9BYE7 350 aa14.98□□□□□ -0.01
CPD-204ENST00000580396 PABPN1Q86U42 306 aaKnown RBP eCLIP14.87□□□□□ -0.03
CPD-204ENST00000580396 SCRIBQ14160 1630 aa14.87□□□□□ -0.03
CPD-204ENST00000580396 RSF1Q96T23 1441 aaPredicted RBP14.87□□□□□ -0.03
CPD-204ENST00000580396 LOC105371045A0A1W2PR82 267 aa14.85□□□□□ -0.03
CPD-204ENST00000580396 HMGXB3Q12766 1538 aa14.84□□□□□ -0.03
CPD-204ENST00000580396 LAMC3Q9Y6N6 1575 aa14.83□□□□□ -0.04
CPD-204ENST00000580396 NCAPD3P42695 1498 aa14.79□□□□□ -0.04
CPD-204ENST00000580396 TRIM26Q12899 539 aaPredicted RBP14.76□□□□□ -0.05
CPD-204ENST00000580396 KCNA4P22459 653 aa14.76□□□□□ -0.05
CPD-204ENST00000580396 ERCC6Q03468 1493 aa14.75□□□□□ -0.05
CPD-204ENST00000580396 CSRNP3Q8WYN3 585 aa14.74□□□□□ -0.05
CPD-204ENST00000580396 SMARCA2P51531 1590 aa14.73□□□□□ -0.05
CPD-204ENST00000580396 DAXXQ9UER7 740 aaPredicted RBP14.72□□□□□ -0.05
CPD-204ENST00000580396 PPARGC1BQ86YN6 1023 aaKnown RBP14.71□□□□□ -0.05
CPD-204ENST00000580396 BAZ1AQ9NRL2 1556 aaPredicted RBP14.71□□□□□ -0.05
CPD-204ENST00000580396 NCBP3Q53F19 620 aaKnown RBP14.66□□□□□ -0.06
CPD-204ENST00000580396 TRIM41Q8WV44 630 aa14.64□□□□□ -0.07
CPD-204ENST00000580396 WDR62O43379 1518 aa14.63□□□□□ -0.07
CPD-204ENST00000580396 AMER1Q5JTC6 1135 aaPredicted RBP14.62□□□□□ -0.07
CPD-204ENST00000580396 PRKCSHP14314 528 aaPredicted RBP14.6□□□□□ -0.07
CPD-204ENST00000580396 MROH2BQ7Z745 1585 aa14.56□□□□□ -0.08
CPD-204ENST00000580396 RIMBP3CA6NJZ7 1639 aa14.56□□□□□ -0.08
CPD-204ENST00000580396 RIMBP3BA6NNM3 1639 aa14.56□□□□□ -0.08
CPD-204ENST00000580396 ZEB1P37275 1124 aaPredicted RBP14.56□□□□□ -0.08
CPD-204ENST00000580396 RIMBP3Q9UFD9 1639 aa14.56□□□□□ -0.08
CPD-204ENST00000580396 PEG3Q9GZU2 1588 aa14.52□□□□□ -0.09
CPD-204ENST00000580396 WIZO95785 1651 aa14.5□□□□□ -0.09
CPD-204ENST00000580396 FAM9AQ8IZU1 332 aaPredicted RBP14.43□□□□□ -0.1
CPD-204ENST00000580396 PDS5BQ9NTI5 1447 aa14.42□□□□□ -0.1
CPD-204ENST00000580396 ERCC6L2Q5T890 1561 aa14.4□□□□□ -0.1
CPD-204ENST00000580396 MRC2Q9UBG0 1479 aa14.39□□□□□ -0.11
CPD-204ENST00000580396 WDR97A6NE52 1622 aa14.38□□□□□ -0.11
CPD-204ENST00000580396 TOP2AP11388 1531 aaKnown RBP14.33□□□□□ -0.12
CPD-204ENST00000580396 KIF21AQ7Z4S6 1674 aa14.3□□□□□ -0.12
CPD-204ENST00000580396 ARHGEF11O15085 1522 aa14.29□□□□□ -0.12
CPD-204ENST00000580396 SMARCA4P51532 1647 aa14.28□□□□□ -0.12
CPD-204ENST00000580396 OSCARQ8IYS5 282 aa14.27□□□□□ -0.12
CPD-204ENST00000580396 BAZ1BQ9UIG0 1483 aaKnown RBP14.23□□□□□ -0.13
CPD-204ENST00000580396 CCDC88BA6NC98 1476 aa14.21□□□□□ -0.13
CPD-204ENST00000580396 WRNQ14191 1432 aaPredicted RBP eCLIP14.2□□□□□ -0.14
CPD-204ENST00000580396 ATAD2BQ9ULI0 1458 aa14.19□□□□□ -0.14
CPD-204ENST00000580396 ABCC8Q09428 1581 aa14.18□□□□□ -0.14
CPD-204ENST00000580396 TIMELESSQ9UNS1 1208 aa14.15□□□□□ -0.14
CPD-204ENST00000580396 EEA1Q15075 1411 aa14.15□□□□□ -0.14
CPD-204ENST00000580396 PRDM2Q13029 1718 aa14.11□□□□□ -0.15
CPD-204ENST00000580396 TNIKQ9UKE5 1360 aa14.1□□□□□ -0.15
CPD-204ENST00000580396 CEP162Q5TB80 1403 aa14.1□□□□□ -0.15
CPD-204ENST00000580396 SOGA1O94964 1423 aa14.06□□□□□ -0.16
CPD-204ENST00000580396 NESP48681 1621 aa14.06□□□□□ -0.16
CPD-204ENST00000580396 CCER1Q8TC90 406 aaPredicted RBP14.06□□□□□ -0.16
CPD-204ENST00000580396 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.05□□□□□ -0.16
CPD-204ENST00000580396 PELP1Q8IZL8 1130 aaKnown RBP14.03□□□□□ -0.16
CPD-204ENST00000580396 SCAF1Q9H7N4 1312 aaKnown RBP14.02□□□□□ -0.17
CPD-204ENST00000580396 GOLGA3Q08378 1498 aa14.01□□□□□ -0.17
CPD-204ENST00000580396 SLC4A1APQ9BWU0 796 aaKnown RBP14□□□□□ -0.17
CPD-204ENST00000580396 ARAP1Q96P48 1450 aa13.99□□□□□ -0.17
CPD-204ENST00000580396 RUSC2Q8N2Y8 1516 aa13.98□□□□□ -0.17
CPD-204ENST00000580396 TULP1O00294 542 aaPredicted RBP13.96□□□□□ -0.17
CPD-204ENST00000580396 KIF21BO75037 1637 aa13.95□□□□□ -0.18
CPD-204ENST00000580396 TAOK2Q9UL54 1235 aa13.95□□□□□ -0.18
CPD-204ENST00000580396 IFT140Q96RY7 1462 aa13.95□□□□□ -0.18
CPD-204ENST00000580396 CLASP1Q7Z460 1538 aa13.93□□□□□ -0.18
CPD-204ENST00000580396 ILDR1Q86SU0 546 aaPredicted RBP13.92□□□□□ -0.18
CPD-204ENST00000580396 CEP164Q9UPV0 1460 aa13.92□□□□□ -0.18
CPD-204ENST00000580396 ARXQ96QS3 562 aa13.92□□□□□ -0.18
CPD-204ENST00000580396 SYNJ1O43426 1573 aa13.91□□□□□ -0.18
CPD-204ENST00000580396 UBTFP17480 764 aaKnown RBP13.9□□□□□ -0.18
CPD-204ENST00000580396 CADPSQ9ULU8 1353 aa13.88□□□□□ -0.19
CPD-204ENST00000580396 ACIN1Q9UKV3 1341 aaKnown RBP13.88□□□□□ -0.19
CPD-204ENST00000580396 DIEXFQ68CQ4 756 aaKnown RBP13.88□□□□□ -0.19
CPD-204ENST00000580396 TTBK1Q5TCY1 1321 aaPredicted RBP13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms