RNA–Protein interactions for RNA: ENST00000493278.1

CALU-204, Transcript of calumenin, humanhuman

TSL 3

Gene CALU, Length 589 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALU-204ENST00000493278 AEBP2Q6ZN18 517 aaPredicted RBP19.72■□□□□ 0.75
CALU-204ENST00000493278 CHIC1Q5VXU3 224 aa18.38■□□□□ 0.53
CALU-204ENST00000493278 SENP3Q9H4L4 574 aaPredicted RBP16.92■□□□□ 0.3
CALU-204ENST00000493278 PHF23Q9BUL5 403 aaPredicted RBP16.59■□□□□ 0.25
CALU-204ENST00000493278 POTEDQ86YR6 584 aa16.15■□□□□ 0.18
CALU-204ENST00000493278 FOXD1Q16676 465 aa15.88■□□□□ 0.13
CALU-204ENST00000493278 MSH5O43196 834 aa15.16■□□□□ 0.02
CALU-204ENST00000493278 PIAS4Q8N2W9 510 aaPredicted RBP14.64□□□□□ -0.07
CALU-204ENST00000493278 PPP6R1Q9UPN7 881 aa14.24□□□□□ -0.13
CALU-204ENST00000493278 ADRA2BP18089 450 aa14.14□□□□□ -0.15
CALU-204ENST00000493278 PLPPR3Q6T4P5 718 aa13.97□□□□□ -0.17
CALU-204ENST00000493278 CACNB1Q02641 598 aaPredicted RBP13.48□□□□□ -0.25
CALU-204ENST00000493278 DMRT2Q9Y5R5 561 aa13.31□□□□□ -0.28
CALU-204ENST00000493278 MAPK8IP2Q13387 824 aaPredicted RBP13.23□□□□□ -0.29
CALU-204ENST00000493278 SCAF1Q9H7N4 1312 aaKnown RBP12.91□□□□□ -0.34
CALU-204ENST00000493278 RNF39Q9H2S5 420 aa12.87□□□□□ -0.35
CALU-204ENST00000493278 DCAF8L1A6NGE4 600 aa12.77□□□□□ -0.37
CALU-204ENST00000493278 C1QBPQ07021 282 aaKnown RBP12.63□□□□□ -0.39
CALU-204ENST00000493278 HOXD11P31277 338 aaPredicted RBP12.51□□□□□ -0.41
CALU-204ENST00000493278 POTEHQ6S545 545 aa12.5□□□□□ -0.41
CALU-204ENST00000493278 DNAJC5BQ9UF47 199 aa12.23□□□□□ -0.45
CALU-204ENST00000493278 RNF216Q9NWF9 866 aaPredicted RBP12.19□□□□□ -0.46
CALU-204ENST00000493278 PPP4R3CPQ6ZMV5 832 aa12.14□□□□□ -0.47
CALU-204ENST00000493278 CNKSR2Q8WXI2 1034 aa12.1□□□□□ -0.47
CALU-204ENST00000493278 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.89□□□□□ -0.512e-11■■□□□ 13.4
CALU-204ENST00000493278 DSG3P32926 999 aa11.78□□□□□ -0.52
CALU-204ENST00000493278 NISCHQ9Y2I1 1504 aa11.68□□□□□ -0.54
CALU-204ENST00000493278 CAPN15O75808 1086 aa11.64□□□□□ -0.55
CALU-204ENST00000493278 SPINK5Q9NQ38 1064 aaPredicted RBP11.64□□□□□ -0.55
CALU-204ENST00000493278 U3KPZ7 1027 aaPredicted RBP11.58□□□□□ -0.56
CALU-204ENST00000493278 NCBP3Q53F19 620 aaKnown RBP11.43□□□□□ -0.58
CALU-204ENST00000493278 SP7Q8TDD2 431 aaPredicted RBP11.35□□□□□ -0.59
CALU-204ENST00000493278 ABCB7O75027 752 aa11.32□□□□□ -0.6
CALU-204ENST00000493278 CHRDL2Q6WN34 429 aa11.32□□□□□ -0.6
CALU-204ENST00000493278 NPM3O75607 178 aaKnown RBP11.28□□□□□ -0.6
CALU-204ENST00000493278 TRHP20396 242 aaPredicted RBP11.27□□□□□ -0.61
CALU-204ENST00000493278 RBM42Q9BTD8 480 aaKnown RBP11.25□□□□□ -0.61
CALU-204ENST00000493278 ZNF219Q9P2Y4 722 aaPredicted RBP11.22□□□□□ -0.61
CALU-204ENST00000493278 APLP2Q06481 763 aa11.14□□□□□ -0.63
CALU-204ENST00000493278 KCNA4P22459 653 aa11.06□□□□□ -0.64
CALU-204ENST00000493278 SLC4A2P04920 1241 aa10.98□□□□□ -0.65
CALU-204ENST00000493278 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.94□□□□□ -0.66
CALU-204ENST00000493278 HNRNPUL2Q1KMD3 747 aaKnown RBP10.94□□□□□ -0.66
CALU-204ENST00000493278 HAX1O00165 279 aa10.89□□□□□ -0.67
CALU-204ENST00000493278 PIP4P2Q8N4L2 257 aa10.89□□□□□ -0.67
CALU-204ENST00000493278 SAMD1Q6SPF0 538 aaPredicted RBP10.85□□□□□ -0.67
CALU-204ENST00000493278 AKT1S1Q96B36 256 aa10.83□□□□□ -0.68
CALU-204ENST00000493278 POLA2Q14181 598 aa10.79□□□□□ -0.68
CALU-204ENST00000493278 REM2Q8IYK8 340 aaPredicted RBP10.73□□□□□ -0.69
CALU-204ENST00000493278 EVX2Q03828 476 aa10.72□□□□□ -0.69
CALU-204ENST00000493278 FXR2P51116 673 aaKnown RBP eCLIP10.7□□□□□ -0.7
CALU-204ENST00000493278 PITPNM1O00562 1244 aa10.63□□□□□ -0.71
CALU-204ENST00000493278 LHX8Q68G74 356 aa10.63□□□□□ -0.71
CALU-204ENST00000493278 PLSCR2Q9NRY7 297 aa10.61□□□□□ -0.71
CALU-204ENST00000493278 ZBTB12Q9Y330 459 aaPredicted RBP10.5□□□□□ -0.73
CALU-204ENST00000493278 OSCARQ8IYS5 282 aa10.49□□□□□ -0.73
CALU-204ENST00000493278 SLC4A1APQ9BWU0 796 aaKnown RBP10.46□□□□□ -0.73
CALU-204ENST00000493278 MYCNP04198 464 aaPredicted RBP10.44□□□□□ -0.74
CALU-204ENST00000493278 GABBR2O75899 941 aa10.42□□□□□ -0.74
CALU-204ENST00000493278 C19orf67A6NJJ6 358 aa10.39□□□□□ -0.75
CALU-204ENST00000493278 PRKAR2AP13861 404 aaKnown RBP10.34□□□□□ -0.75
CALU-204ENST00000493278 FOXD4L1Q9NU39 408 aa10.34□□□□□ -0.75
CALU-204ENST00000493278 CCDC180Q9P1Z9 1646 aa10.33□□□□□ -0.76
CALU-204ENST00000493278 ATF5Q9Y2D1 282 aaPredicted RBP10.28□□□□□ -0.76
CALU-204ENST00000493278 POTEIP0CG38 1075 aa10.21□□□□□ -0.77
CALU-204ENST00000493278 ZBTB22O15209 634 aa10.18□□□□□ -0.78
CALU-204ENST00000493278 CLEC11AQ9Y240 323 aa10.15□□□□□ -0.78
CALU-204ENST00000493278 SPDYE1Q8NFV5 336 aaPredicted RBP10.13□□□□□ -0.79
CALU-204ENST00000493278 SPDYE2BA6NHP3 402 aa10.12□□□□□ -0.79
CALU-204ENST00000493278 SPDYE6P0CI01 402 aa10.12□□□□□ -0.79
CALU-204ENST00000493278 SPDYE2Q495Y8 402 aa10.12□□□□□ -0.79
CALU-204ENST00000493278 ATXN8OSP0DMR3 200 aa10.09□□□□□ -0.79
CALU-204ENST00000493278 CHADLQ6NUI6 762 aa10.06□□□□□ -0.8
CALU-204ENST00000493278 POTEMA6NI47 508 aa10.05□□□□□ -0.8
CALU-204ENST00000493278 POTEGQ6S5H5 508 aa9.99□□□□□ -0.81
CALU-204ENST00000493278 OTUD5Q96G74 571 aa9.98□□□□□ -0.81
CALU-204ENST00000493278 CLCN6P51797 869 aa9.97□□□□□ -0.81
CALU-204ENST00000493278 CD44P16070 742 aaKnown RBP9.96□□□□□ -0.82
CALU-204ENST00000493278 DCBLD2Q96PD2 775 aa9.96□□□□□ -0.82
CALU-204ENST00000493278 PCDH10Q9P2E7 1040 aa9.92□□□□□ -0.82
CALU-204ENST00000493278 SSUH2Q9Y2M2 353 aa9.91□□□□□ -0.82
CALU-204ENST00000493278 FBLN2P98095 1184 aa9.9□□□□□ -0.82
CALU-204ENST00000493278 PRR29P0C7W0 189 aa9.87□□□□□ -0.83
CALU-204ENST00000493278 POTEB2H3BUK9 544 aa9.86□□□□□ -0.83
CALU-204ENST00000493278 ZNF692Q9BU19 519 aaPredicted RBP9.86□□□□□ -0.83
CALU-204ENST00000493278 ZCCHC6Q5VYS8 1495 aaKnown RBP9.84□□□□□ -0.83
CALU-204ENST00000493278 FARP1Q9Y4F1 1045 aaPredicted RBP9.82□□□□□ -0.84
CALU-204ENST00000493278 DCAF1Q9Y4B6 1507 aa9.78□□□□□ -0.84
CALU-204ENST00000493278 ZNF579Q8NAF0 562 aaKnown RBP9.78□□□□□ -0.84
CALU-204ENST00000493278 CSRNP3Q8WYN3 585 aa9.77□□□□□ -0.85
CALU-204ENST00000493278 MKRN4PQ13434 485 aaPredicted RBP9.76□□□□□ -0.85
CALU-204ENST00000493278 GALR2O43603 387 aaPredicted RBP9.72□□□□□ -0.85
CALU-204ENST00000493278 MYO15BQ96JP2 1530 aa9.71□□□□□ -0.86
CALU-204ENST00000493278 PABPN1Q86U42 306 aaKnown RBP eCLIP9.7□□□□□ -0.86
CALU-204ENST00000493278 ZRANB1Q9UGI0 708 aa9.7□□□□□ -0.86
CALU-204ENST00000493278 LCE2DQ5TA82 110 aaPredicted RBP9.68□□□□□ -0.86
CALU-204ENST00000493278 PELP1Q8IZL8 1130 aaKnown RBP9.61□□□□□ -0.87
CALU-204ENST00000493278 POTEJP0CG39 1038 aa9.59□□□□□ -0.87
CALU-204ENST00000493278 FAM163AQ96GL9 167 aaPredicted RBP9.58□□□□□ -0.88
CALU-204ENST00000493278 EHMT2Q96KQ7 1210 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms