Protein–RNA interactions for Protein: Q71F78

LCA10, Putative lung carcinoma-associated protein 10, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA10Q71F78 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC10.44□□□□□ -0.74
LCA10Q71F78 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
LCA10Q71F78 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
LCA10Q71F78 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
LCA10Q71F78 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
LCA10Q71F78 AL136379.1-201ENST00000623471 2642 ntBASIC10.44□□□□□ -0.74
LCA10Q71F78 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
LCA10Q71F78 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
LCA10Q71F78 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC10.44□□□□□ -0.74
LCA10Q71F78 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC10.44□□□□□ -0.74
LCA10Q71F78 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC10.44□□□□□ -0.74
LCA10Q71F78 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC10.44□□□□□ -0.74
LCA10Q71F78 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
LCA10Q71F78 AC135776.1-201ENST00000319817 2481 ntBASIC10.44□□□□□ -0.74
LCA10Q71F78 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
LCA10Q71F78 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC10.44□□□□□ -0.74
LCA10Q71F78 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
LCA10Q71F78 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
LCA10Q71F78 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
LCA10Q71F78 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC10.44□□□□□ -0.74
LCA10Q71F78 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC10.44□□□□□ -0.74
LCA10Q71F78 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC10.44□□□□□ -0.74
LCA10Q71F78 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
LCA10Q71F78 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC10.43□□□□□ -0.74
LCA10Q71F78 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
LCA10Q71F78 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC10.43□□□□□ -0.74
LCA10Q71F78 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
LCA10Q71F78 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
LCA10Q71F78 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
LCA10Q71F78 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
LCA10Q71F78 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC10.43□□□□□ -0.74
LCA10Q71F78 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
LCA10Q71F78 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC10.43□□□□□ -0.74
LCA10Q71F78 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
LCA10Q71F78 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
LCA10Q71F78 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
LCA10Q71F78 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
LCA10Q71F78 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
LCA10Q71F78 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
LCA10Q71F78 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
LCA10Q71F78 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
LCA10Q71F78 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
LCA10Q71F78 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
LCA10Q71F78 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
LCA10Q71F78 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
LCA10Q71F78 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC10.43□□□□□ -0.74
LCA10Q71F78 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
LCA10Q71F78 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
LCA10Q71F78 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC10.43□□□□□ -0.74
LCA10Q71F78 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
LCA10Q71F78 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
LCA10Q71F78 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
LCA10Q71F78 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
LCA10Q71F78 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
LCA10Q71F78 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
LCA10Q71F78 PALM-207ENST00000590161 2137 ntTSL 4 BASIC10.43□□□□□ -0.74
LCA10Q71F78 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
LCA10Q71F78 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
LCA10Q71F78 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
LCA10Q71F78 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
LCA10Q71F78 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
LCA10Q71F78 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC10.43□□□□□ -0.74
LCA10Q71F78 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
LCA10Q71F78 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC10.43□□□□□ -0.74
LCA10Q71F78 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
LCA10Q71F78 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
LCA10Q71F78 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
LCA10Q71F78 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
LCA10Q71F78 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
LCA10Q71F78 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
LCA10Q71F78 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC10.43□□□□□ -0.74
LCA10Q71F78 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC10.43□□□□□ -0.74
LCA10Q71F78 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
LCA10Q71F78 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
LCA10Q71F78 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
LCA10Q71F78 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
LCA10Q71F78 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC10.42□□□□□ -0.74
LCA10Q71F78 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LCA10Q71F78 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC10.42□□□□□ -0.74
LCA10Q71F78 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LCA10Q71F78 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LCA10Q71F78 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LCA10Q71F78 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC10.42□□□□□ -0.74
LCA10Q71F78 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC10.42□□□□□ -0.74
LCA10Q71F78 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC10.42□□□□□ -0.74
LCA10Q71F78 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
LCA10Q71F78 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
LCA10Q71F78 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
LCA10Q71F78 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
LCA10Q71F78 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
LCA10Q71F78 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC10.42□□□□□ -0.74
LCA10Q71F78 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC10.42□□□□□ -0.74
LCA10Q71F78 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
LCA10Q71F78 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC10.42□□□□□ -0.74
LCA10Q71F78 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LCA10Q71F78 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LCA10Q71F78 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LCA10Q71F78 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
LCA10Q71F78 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC10.42□□□□□ -0.74
LCA10Q71F78 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC10.42□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms