Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.31■□□□□ 0.68
NUBP1P53384 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
NUBP1P53384 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
NUBP1P53384 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NUBP1P53384 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
NUBP1P53384 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
NUBP1P53384 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NUBP1P53384 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
NUBP1P53384 AL162741.1-201ENST00000565563 1558 ntBASIC19.31■□□□□ 0.68
NUBP1P53384 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
NUBP1P53384 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NUBP1P53384 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC19.31■□□□□ 0.68
NUBP1P53384 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NUBP1P53384 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
NUBP1P53384 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
NUBP1P53384 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NUBP1P53384 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NUBP1P53384 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
NUBP1P53384 MYL10-201ENST00000223167 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NUBP1P53384 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NUBP1P53384 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.3■□□□□ 0.68
NUBP1P53384 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
NUBP1P53384 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
NUBP1P53384 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC19.3■□□□□ 0.68
NUBP1P53384 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
NUBP1P53384 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC19.3■□□□□ 0.68
NUBP1P53384 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC19.3■□□□□ 0.68
NUBP1P53384 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NUBP1P53384 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NUBP1P53384 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NUBP1P53384 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NUBP1P53384 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.3■□□□□ 0.68
NUBP1P53384 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC19.3■□□□□ 0.68
NUBP1P53384 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
NUBP1P53384 TMEM179-206ENST00000616017 1645 ntBASIC19.29■□□□□ 0.68
NUBP1P53384 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NUBP1P53384 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.29■□□□□ 0.68
NUBP1P53384 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC19.29■□□□□ 0.68
NUBP1P53384 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
NUBP1P53384 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NUBP1P53384 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NUBP1P53384 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NUBP1P53384 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NUBP1P53384 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NUBP1P53384 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC19.29■□□□□ 0.68
NUBP1P53384 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NUBP1P53384 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC19.29■□□□□ 0.68
NUBP1P53384 AC092865.5-201ENST00000545435 363 ntBASIC19.29■□□□□ 0.68
NUBP1P53384 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC19.29■□□□□ 0.68
NUBP1P53384 NAA38-203ENST00000575071 553 ntTSL 2 BASIC19.29■□□□□ 0.68
NUBP1P53384 AL353801.3-201ENST00000609898 542 ntBASIC19.29■□□□□ 0.68
NUBP1P53384 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
NUBP1P53384 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC19.29■□□□□ 0.68
NUBP1P53384 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NUBP1P53384 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NUBP1P53384 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
NUBP1P53384 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
NUBP1P53384 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NUBP1P53384 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NUBP1P53384 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.28■□□□□ 0.68
NUBP1P53384 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.28■□□□□ 0.68
NUBP1P53384 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.28■□□□□ 0.68
NUBP1P53384 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
NUBP1P53384 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC19.28■□□□□ 0.68
NUBP1P53384 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
NUBP1P53384 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
NUBP1P53384 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC19.28■□□□□ 0.68
NUBP1P53384 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NUBP1P53384 LRRIQ3-202ENST00000370909 793 ntTSL 5 BASIC19.28■□□□□ 0.68
NUBP1P53384 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC19.28■□□□□ 0.68
NUBP1P53384 TLE1-202ENST00000376484 666 ntTSL 3 BASIC19.28■□□□□ 0.68
NUBP1P53384 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
NUBP1P53384 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC19.28■□□□□ 0.68
NUBP1P53384 LINC00265-3P-201ENST00000447588 903 ntBASIC19.28■□□□□ 0.68
NUBP1P53384 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC19.28■□□□□ 0.68
NUBP1P53384 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC19.28■□□□□ 0.68
NUBP1P53384 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC19.28■□□□□ 0.68
NUBP1P53384 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC19.28■□□□□ 0.68
NUBP1P53384 SPEG-225ENST00000617028 815 ntTSL 5 BASIC19.28■□□□□ 0.68
NUBP1P53384 WDR6-223ENST00000627177 207 ntTSL 2 BASIC19.28■□□□□ 0.68
NUBP1P53384 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NUBP1P53384 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NUBP1P53384 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NUBP1P53384 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NUBP1P53384 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
NUBP1P53384 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC19.27■□□□□ 0.68
NUBP1P53384 AL117328.2-201ENST00000624617 1940 ntBASIC19.27■□□□□ 0.68
NUBP1P53384 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NUBP1P53384 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
NUBP1P53384 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
NUBP1P53384 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
NUBP1P53384 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.27■□□□□ 0.68
NUBP1P53384 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC19.27■□□□□ 0.68
NUBP1P53384 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC19.27■□□□□ 0.68
NUBP1P53384 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC19.27■□□□□ 0.68
NUBP1P53384 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC19.27■□□□□ 0.68
NUBP1P53384 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC19.27■□□□□ 0.68
NUBP1P53384 AP001005.1-201ENST00000571755 1248 ntBASIC19.27■□□□□ 0.68
NUBP1P53384 AC110921.1-201ENST00000577544 612 ntTSL 3 BASIC19.27■□□□□ 0.68
NUBP1P53384 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms