Protein–RNA interactions for Protein: P40429

RPL13A, 60S ribosomal protein L13a, humanhuman

Known RBP Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13AP40429 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RPL13AP40429 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC13.38□□□□□ -0.27
RPL13AP40429 MIR638-201ENST00000385237 100 ntBASIC13.38□□□□□ -0.27
RPL13AP40429 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC13.38□□□□□ -0.27
RPL13AP40429 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RPL13AP40429 PBX2P1-201ENST00000493219 1291 ntBASIC13.38□□□□□ -0.27
RPL13AP40429 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC13.38□□□□□ -0.27
RPL13AP40429 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RPL13AP40429 AL136162.1-201ENST00000607711 1078 ntBASIC13.38□□□□□ -0.27
RPL13AP40429 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC13.38□□□□□ -0.27
RPL13AP40429 AC106739.1-201ENST00000617035 715 ntBASIC13.38□□□□□ -0.27
RPL13AP40429 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC13.38□□□□□ -0.27
RPL13AP40429 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
RPL13AP40429 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
RPL13AP40429 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RPL13AP40429 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
RPL13AP40429 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
RPL13AP40429 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RPL13AP40429 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
RPL13AP40429 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC13.38□□□□□ -0.27
RPL13AP40429 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RPL13AP40429 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RPL13AP40429 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
RPL13AP40429 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC13.37□□□□□ -0.27
RPL13AP40429 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RPL13AP40429 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RPL13AP40429 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC13.37□□□□□ -0.27
RPL13AP40429 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
RPL13AP40429 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
RPL13AP40429 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RPL13AP40429 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
RPL13AP40429 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
RPL13AP40429 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RPL13AP40429 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RPL13AP40429 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RPL13AP40429 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RPL13AP40429 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
RPL13AP40429 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RPL13AP40429 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
RPL13AP40429 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RPL13AP40429 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC13.37□□□□□ -0.27
RPL13AP40429 UNC93B3-201ENST00000308076 687 ntBASIC13.37□□□□□ -0.27
RPL13AP40429 EDA-201ENST00000338901 1233 ntBASIC13.37□□□□□ -0.27
RPL13AP40429 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
RPL13AP40429 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RPL13AP40429 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC13.37□□□□□ -0.27
RPL13AP40429 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
RPL13AP40429 AC110285.6-201ENST00000617652 491 ntBASIC13.37□□□□□ -0.27
RPL13AP40429 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RPL13AP40429 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
RPL13AP40429 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
RPL13AP40429 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RPL13AP40429 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RPL13AP40429 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RPL13AP40429 Z82202.1-201ENST00000623446 1880 ntBASIC13.37□□□□□ -0.27
RPL13AP40429 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RPL13AP40429 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
RPL13AP40429 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
RPL13AP40429 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
RPL13AP40429 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
RPL13AP40429 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
RPL13AP40429 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC13.37□□□□□ -0.27
RPL13AP40429 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RPL13AP40429 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RPL13AP40429 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
RPL13AP40429 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
RPL13AP40429 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RPL13AP40429 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC13.37□□□□□ -0.27
RPL13AP40429 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RPL13AP40429 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RPL13AP40429 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC13.37□□□□□ -0.27
RPL13AP40429 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
RPL13AP40429 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RPL13AP40429 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
RPL13AP40429 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RPL13AP40429 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC13.36□□□□□ -0.27
RPL13AP40429 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC13.36□□□□□ -0.27
RPL13AP40429 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC13.36□□□□□ -0.27
RPL13AP40429 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC13.36□□□□□ -0.27
RPL13AP40429 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
RPL13AP40429 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
RPL13AP40429 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
RPL13AP40429 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
RPL13AP40429 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
RPL13AP40429 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RPL13AP40429 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
RPL13AP40429 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
RPL13AP40429 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC13.36□□□□□ -0.27
RPL13AP40429 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
RPL13AP40429 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
RPL13AP40429 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
RPL13AP40429 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
RPL13AP40429 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
RPL13AP40429 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RPL13AP40429 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RPL13AP40429 RBM38-205ENST00000440234 686 ntTSL 2 BASIC13.36□□□□□ -0.27
RPL13AP40429 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
RPL13AP40429 AC068587.7-201ENST00000641602 218 ntBASIC13.36□□□□□ -0.27
RPL13AP40429 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
RPL13AP40429 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms