Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 AL160286.2-201ENST00000567150 934 ntBASIC19.33■□□□□ 0.68
HMGCLP35914 AC233702.5-201ENST00000584107 538 ntBASIC19.33■□□□□ 0.68
HMGCLP35914 AC073195.1-201ENST00000607241 877 ntBASIC19.33■□□□□ 0.68
HMGCLP35914 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC19.33■□□□□ 0.68
HMGCLP35914 AP006294.2-201ENST00000641667 209 ntBASIC19.33■□□□□ 0.68
HMGCLP35914 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HMGCLP35914 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
HMGCLP35914 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.33■□□□□ 0.68
HMGCLP35914 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
HMGCLP35914 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
HMGCLP35914 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
HMGCLP35914 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC19.33■□□□□ 0.68
HMGCLP35914 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.33■□□□□ 0.68
HMGCLP35914 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HMGCLP35914 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
HMGCLP35914 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HMGCLP35914 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
HMGCLP35914 AC007952.6-201ENST00000573168 2673 ntBASIC19.32■□□□□ 0.68
HMGCLP35914 AC003957.1-201ENST00000625108 2673 ntBASIC19.32■□□□□ 0.68
HMGCLP35914 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HMGCLP35914 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.32■□□□□ 0.68
HMGCLP35914 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.32■□□□□ 0.68
HMGCLP35914 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
HMGCLP35914 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HMGCLP35914 LINC01465-201ENST00000408887 1940 ntBASIC19.32■□□□□ 0.68
HMGCLP35914 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HMGCLP35914 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HMGCLP35914 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HMGCLP35914 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HMGCLP35914 AP001412.1-201ENST00000608405 714 ntBASIC19.32■□□□□ 0.68
HMGCLP35914 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC19.32■□□□□ 0.68
HMGCLP35914 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.32■□□□□ 0.68
HMGCLP35914 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC19.32■□□□□ 0.68
HMGCLP35914 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
HMGCLP35914 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HMGCLP35914 AC116562.4-201ENST00000641316 2276 ntBASIC19.32■□□□□ 0.68
HMGCLP35914 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HMGCLP35914 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HMGCLP35914 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HMGCLP35914 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
HMGCLP35914 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HMGCLP35914 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
HMGCLP35914 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HMGCLP35914 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HMGCLP35914 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.31■□□□□ 0.68
HMGCLP35914 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HMGCLP35914 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HMGCLP35914 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HMGCLP35914 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HMGCLP35914 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HMGCLP35914 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HMGCLP35914 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC19.31■□□□□ 0.68
HMGCLP35914 RPS2P4-201ENST00000476944 856 ntBASIC19.31■□□□□ 0.68
HMGCLP35914 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HMGCLP35914 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HMGCLP35914 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19.31■□□□□ 0.68
HMGCLP35914 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
HMGCLP35914 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
HMGCLP35914 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HMGCLP35914 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.31■□□□□ 0.68
HMGCLP35914 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
HMGCLP35914 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
HMGCLP35914 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HMGCLP35914 SDHAP1-207ENST00000440850 2000 ntBASIC19.3■□□□□ 0.68
HMGCLP35914 AC005332.7-201ENST00000614046 2005 ntBASIC19.3■□□□□ 0.68
HMGCLP35914 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.3■□□□□ 0.68
HMGCLP35914 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.3■□□□□ 0.68
HMGCLP35914 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC19.3■□□□□ 0.68
HMGCLP35914 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
HMGCLP35914 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
HMGCLP35914 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.3■□□□□ 0.68
HMGCLP35914 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC19.3■□□□□ 0.68
HMGCLP35914 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
HMGCLP35914 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HMGCLP35914 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.3■□□□□ 0.68
HMGCLP35914 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.3■□□□□ 0.68
HMGCLP35914 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
HMGCLP35914 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HMGCLP35914 AC008550.1-201ENST00000511500 884 ntBASIC19.3■□□□□ 0.68
HMGCLP35914 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
HMGCLP35914 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HMGCLP35914 KRT16P1-201ENST00000399124 1418 ntBASIC19.3■□□□□ 0.68
HMGCLP35914 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HMGCLP35914 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HMGCLP35914 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HMGCLP35914 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.3■□□□□ 0.68
HMGCLP35914 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HMGCLP35914 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
HMGCLP35914 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HMGCLP35914 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.29■□□□□ 0.68
HMGCLP35914 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HMGCLP35914 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.29■□□□□ 0.68
HMGCLP35914 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HMGCLP35914 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
HMGCLP35914 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
HMGCLP35914 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HMGCLP35914 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
HMGCLP35914 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
HMGCLP35914 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HMGCLP35914 AC004980.1-204ENST00000429707 299 ntBASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms