Protein–RNA interactions for Protein: P28472

GABRB3, Gamma-aminobutyric acid receptor subunit beta-3, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3P28472 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
GABRB3P28472 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
GABRB3P28472 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC19.27■□□□□ 0.68
GABRB3P28472 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC19.27■□□□□ 0.68
GABRB3P28472 UNC93B5-201ENST00000530315 699 ntBASIC19.27■□□□□ 0.68
GABRB3P28472 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC19.27■□□□□ 0.68
GABRB3P28472 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
GABRB3P28472 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.27■□□□□ 0.68
GABRB3P28472 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.27■□□□□ 0.68
GABRB3P28472 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.27■□□□□ 0.67
GABRB3P28472 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC19.27■□□□□ 0.67
GABRB3P28472 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
GABRB3P28472 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.67
GABRB3P28472 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
GABRB3P28472 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.26■□□□□ 0.67
GABRB3P28472 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
GABRB3P28472 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
GABRB3P28472 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.26■□□□□ 0.67
GABRB3P28472 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
GABRB3P28472 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
GABRB3P28472 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.26■□□□□ 0.67
GABRB3P28472 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
GABRB3P28472 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
GABRB3P28472 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
GABRB3P28472 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC19.26■□□□□ 0.67
GABRB3P28472 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.26■□□□□ 0.67
GABRB3P28472 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.26■□□□□ 0.67
GABRB3P28472 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
GABRB3P28472 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
GABRB3P28472 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.26■□□□□ 0.67
GABRB3P28472 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
GABRB3P28472 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
GABRB3P28472 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
GABRB3P28472 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
GABRB3P28472 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
GABRB3P28472 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
GABRB3P28472 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
GABRB3P28472 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
GABRB3P28472 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
GABRB3P28472 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
GABRB3P28472 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
GABRB3P28472 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC19.25■□□□□ 0.67
GABRB3P28472 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
GABRB3P28472 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
GABRB3P28472 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
GABRB3P28472 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.25■□□□□ 0.67
GABRB3P28472 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
GABRB3P28472 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
GABRB3P28472 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC19.25■□□□□ 0.67
GABRB3P28472 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.25■□□□□ 0.67
GABRB3P28472 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
GABRB3P28472 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
GABRB3P28472 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.25■□□□□ 0.67
GABRB3P28472 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
GABRB3P28472 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
GABRB3P28472 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
GABRB3P28472 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
GABRB3P28472 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
GABRB3P28472 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.25■□□□□ 0.67
GABRB3P28472 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
GABRB3P28472 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
GABRB3P28472 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
GABRB3P28472 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
GABRB3P28472 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GABRB3P28472 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GABRB3P28472 CROCCP3-202ENST00000420820 1947 ntBASIC19.24■□□□□ 0.67
GABRB3P28472 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
GABRB3P28472 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
GABRB3P28472 POM121L13P-201ENST00000422362 380 ntBASIC19.24■□□□□ 0.67
GABRB3P28472 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19.24■□□□□ 0.67
GABRB3P28472 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
GABRB3P28472 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
GABRB3P28472 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GABRB3P28472 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
GABRB3P28472 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
GABRB3P28472 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
GABRB3P28472 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
GABRB3P28472 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GABRB3P28472 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
GABRB3P28472 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.24■□□□□ 0.67
GABRB3P28472 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.24■□□□□ 0.67
GABRB3P28472 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
GABRB3P28472 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
GABRB3P28472 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
GABRB3P28472 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.23■□□□□ 0.67
GABRB3P28472 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
GABRB3P28472 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.23■□□□□ 0.67
GABRB3P28472 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
GABRB3P28472 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
GABRB3P28472 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC19.23■□□□□ 0.67
GABRB3P28472 TUBB8P6-201ENST00000436895 1288 ntBASIC19.23■□□□□ 0.67
GABRB3P28472 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
GABRB3P28472 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.23■□□□□ 0.67
GABRB3P28472 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
GABRB3P28472 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
GABRB3P28472 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
GABRB3P28472 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
GABRB3P28472 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
GABRB3P28472 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
GABRB3P28472 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms