Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.02■□□□□ 0.64
VARSP26640 KLF2-202ENST00000592003 564 ntTSL 3 BASIC19.02■□□□□ 0.64
VARSP26640 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
VARSP26640 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
VARSP26640 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
VARSP26640 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
VARSP26640 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
VARSP26640 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
VARSP26640 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
VARSP26640 MME-217ENST00000616757 1315 ntTSL 5 BASIC19.01■□□□□ 0.63
VARSP26640 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
VARSP26640 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.01■□□□□ 0.63
VARSP26640 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
VARSP26640 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
VARSP26640 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
VARSP26640 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
VARSP26640 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
VARSP26640 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC19.01■□□□□ 0.63
VARSP26640 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
VARSP26640 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC19.01■□□□□ 0.63
VARSP26640 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
VARSP26640 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC19.01■□□□□ 0.63
VARSP26640 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC19.01■□□□□ 0.63
VARSP26640 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC19.01■□□□□ 0.63
VARSP26640 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC19.01■□□□□ 0.63
VARSP26640 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
VARSP26640 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
VARSP26640 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
VARSP26640 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
VARSP26640 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
VARSP26640 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
VARSP26640 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
VARSP26640 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.01■□□□□ 0.63
VARSP26640 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
VARSP26640 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC19■□□□□ 0.63
VARSP26640 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19■□□□□ 0.63
VARSP26640 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19■□□□□ 0.63
VARSP26640 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19■□□□□ 0.63
VARSP26640 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
VARSP26640 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
VARSP26640 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19■□□□□ 0.63
VARSP26640 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19■□□□□ 0.63
VARSP26640 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
VARSP26640 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
VARSP26640 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
VARSP26640 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
VARSP26640 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19■□□□□ 0.63
VARSP26640 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19■□□□□ 0.63
VARSP26640 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
VARSP26640 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC19■□□□□ 0.63
VARSP26640 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC19■□□□□ 0.63
VARSP26640 AC120498.8-201ENST00000614275 531 ntBASIC19■□□□□ 0.63
VARSP26640 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19■□□□□ 0.63
VARSP26640 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
VARSP26640 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19■□□□□ 0.63
VARSP26640 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19■□□□□ 0.63
VARSP26640 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
VARSP26640 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
VARSP26640 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
VARSP26640 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC18.99■□□□□ 0.63
VARSP26640 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC18.99■□□□□ 0.63
VARSP26640 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
VARSP26640 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
VARSP26640 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.99■□□□□ 0.63
VARSP26640 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
VARSP26640 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
VARSP26640 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
VARSP26640 TFP1-202ENST00000475455 1573 ntBASIC18.99■□□□□ 0.63
VARSP26640 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.99■□□□□ 0.63
VARSP26640 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
VARSP26640 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
VARSP26640 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
VARSP26640 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC18.99■□□□□ 0.63
VARSP26640 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
VARSP26640 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
VARSP26640 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
VARSP26640 KRT17P3-201ENST00000420566 1262 ntBASIC18.99■□□□□ 0.63
VARSP26640 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.99■□□□□ 0.63
VARSP26640 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.99■□□□□ 0.63
VARSP26640 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC18.99■□□□□ 0.63
VARSP26640 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC18.99■□□□□ 0.63
VARSP26640 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC18.99■□□□□ 0.63
VARSP26640 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC18.99■□□□□ 0.63
VARSP26640 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
VARSP26640 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
VARSP26640 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
VARSP26640 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
VARSP26640 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
VARSP26640 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
VARSP26640 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.99■□□□□ 0.63
VARSP26640 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
VARSP26640 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
VARSP26640 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.98■□□□□ 0.63
VARSP26640 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
VARSP26640 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
VARSP26640 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
VARSP26640 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
VARSP26640 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
VARSP26640 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
VARSP26640 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms