Protein–RNA interactions for Protein: P16104

H2AFX, Histone H2AX, humanhuman

Predicted RBP Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFXP16104 IRX1P1-201ENST00000438849 1838 ntBASIC20.17■□□□□ 0.82
H2AFXP16104 GNAS-203ENST00000306120 1878 ntBASIC20.17■□□□□ 0.82
H2AFXP16104 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC20.17■□□□□ 0.82
H2AFXP16104 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC20.17■□□□□ 0.82
H2AFXP16104 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
H2AFXP16104 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC20.17■□□□□ 0.82
H2AFXP16104 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
H2AFXP16104 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
H2AFXP16104 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
H2AFXP16104 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
H2AFXP16104 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
H2AFXP16104 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
H2AFXP16104 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC20.16■□□□□ 0.82
H2AFXP16104 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
H2AFXP16104 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
H2AFXP16104 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
H2AFXP16104 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
H2AFXP16104 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
H2AFXP16104 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC20.16■□□□□ 0.82
H2AFXP16104 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
H2AFXP16104 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.16■□□□□ 0.82
H2AFXP16104 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
H2AFXP16104 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.16■□□□□ 0.82
H2AFXP16104 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
H2AFXP16104 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC20.16■□□□□ 0.82
H2AFXP16104 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.16■□□□□ 0.82
H2AFXP16104 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.16■□□□□ 0.82
H2AFXP16104 AC138907.5-202ENST00000569484 235 ntBASIC20.16■□□□□ 0.82
H2AFXP16104 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
H2AFXP16104 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
H2AFXP16104 AC080080.1-201ENST00000625121 2420 ntBASIC20.16■□□□□ 0.82
H2AFXP16104 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC20.16■□□□□ 0.82
H2AFXP16104 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
H2AFXP16104 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC20.16■□□□□ 0.82
H2AFXP16104 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
H2AFXP16104 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
H2AFXP16104 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
H2AFXP16104 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
H2AFXP16104 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
H2AFXP16104 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
H2AFXP16104 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
H2AFXP16104 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
H2AFXP16104 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
H2AFXP16104 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC20.15■□□□□ 0.82
H2AFXP16104 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
H2AFXP16104 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
H2AFXP16104 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
H2AFXP16104 AL031963.3-201ENST00000606441 850 ntBASIC20.15■□□□□ 0.82
H2AFXP16104 AC120498.10-201ENST00000621827 505 ntBASIC20.15■□□□□ 0.82
H2AFXP16104 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
H2AFXP16104 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.15■□□□□ 0.82
H2AFXP16104 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.15■□□□□ 0.82
H2AFXP16104 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
H2AFXP16104 PHGDH-210ENST00000641115 1638 ntBASIC20.15■□□□□ 0.82
H2AFXP16104 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC20.15■□□□□ 0.82
H2AFXP16104 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
H2AFXP16104 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
H2AFXP16104 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
H2AFXP16104 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
H2AFXP16104 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
H2AFXP16104 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
H2AFXP16104 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
H2AFXP16104 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
H2AFXP16104 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
H2AFXP16104 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC20.15■□□□□ 0.82
H2AFXP16104 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
H2AFXP16104 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.82
H2AFXP16104 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC20.14■□□□□ 0.82
H2AFXP16104 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC20.14■□□□□ 0.82
H2AFXP16104 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC20.14■□□□□ 0.82
H2AFXP16104 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
H2AFXP16104 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
H2AFXP16104 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
H2AFXP16104 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC20.14■□□□□ 0.81
H2AFXP16104 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
H2AFXP16104 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
H2AFXP16104 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
H2AFXP16104 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.14■□□□□ 0.81
H2AFXP16104 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.14■□□□□ 0.81
H2AFXP16104 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.14■□□□□ 0.81
H2AFXP16104 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
H2AFXP16104 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC20.14■□□□□ 0.81
H2AFXP16104 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
H2AFXP16104 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
H2AFXP16104 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC20.14■□□□□ 0.81
H2AFXP16104 AL645608.8-201ENST00000606034 2086 ntBASIC20.14■□□□□ 0.81
H2AFXP16104 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
H2AFXP16104 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
H2AFXP16104 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
H2AFXP16104 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
H2AFXP16104 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
H2AFXP16104 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
H2AFXP16104 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC20.13■□□□□ 0.81
H2AFXP16104 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
H2AFXP16104 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
H2AFXP16104 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
H2AFXP16104 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC20.13■□□□□ 0.81
H2AFXP16104 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
H2AFXP16104 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.13■□□□□ 0.81
H2AFXP16104 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms