Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLPTM1O96005 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLPTM1O96005 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.26■□□□□ 0.51
CLPTM1O96005 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLPTM1O96005 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
CLPTM1O96005 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLPTM1O96005 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CLPTM1O96005 BCL2-203ENST00000589955 5011 ntBASIC18.26■□□□□ 0.51
CLPTM1O96005 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLPTM1O96005 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.26■□□□□ 0.51
CLPTM1O96005 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CLPTM1O96005 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLPTM1O96005 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC18.25■□□□□ 0.51
CLPTM1O96005 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC18.25■□□□□ 0.51
CLPTM1O96005 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLPTM1O96005 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.25■□□□□ 0.51
CLPTM1O96005 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC18.25■□□□□ 0.51
CLPTM1O96005 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.25■□□□□ 0.51
CLPTM1O96005 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLPTM1O96005 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.25■□□□□ 0.51
CLPTM1O96005 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
CLPTM1O96005 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.25■□□□□ 0.51
CLPTM1O96005 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLPTM1O96005 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLPTM1O96005 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLPTM1O96005 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC18.25■□□□□ 0.51
CLPTM1O96005 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CLPTM1O96005 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC18.25■□□□□ 0.51
CLPTM1O96005 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC18.25■□□□□ 0.51
CLPTM1O96005 TESC-206ENST00000541210 936 ntTSL 3 BASIC18.25■□□□□ 0.51
CLPTM1O96005 AC092666.2-201ENST00000613287 246 ntBASIC18.25■□□□□ 0.51
CLPTM1O96005 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CLPTM1O96005 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLPTM1O96005 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CLPTM1O96005 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC18.25■□□□□ 0.51
CLPTM1O96005 KRT87P-202ENST00000534226 1464 ntBASIC18.25■□□□□ 0.51
CLPTM1O96005 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CLPTM1O96005 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
CLPTM1O96005 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLPTM1O96005 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLPTM1O96005 DPP3P2-201ENST00000416030 1696 ntBASIC18.25■□□□□ 0.51
CLPTM1O96005 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLPTM1O96005 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLPTM1O96005 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLPTM1O96005 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.24■□□□□ 0.51
CLPTM1O96005 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CLPTM1O96005 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLPTM1O96005 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.24■□□□□ 0.51
CLPTM1O96005 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLPTM1O96005 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLPTM1O96005 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC18.24■□□□□ 0.51
CLPTM1O96005 AC022517.1-201ENST00000592429 346 ntBASIC18.24■□□□□ 0.51
CLPTM1O96005 MIR2861-201ENST00000636310 90 ntBASIC18.24■□□□□ 0.51
CLPTM1O96005 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.24■□□□□ 0.51
CLPTM1O96005 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLPTM1O96005 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.24■□□□□ 0.51
CLPTM1O96005 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLPTM1O96005 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLPTM1O96005 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
CLPTM1O96005 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.24■□□□□ 0.51
CLPTM1O96005 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
CLPTM1O96005 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLPTM1O96005 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLPTM1O96005 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLPTM1O96005 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CLPTM1O96005 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
CLPTM1O96005 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLPTM1O96005 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CLPTM1O96005 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLPTM1O96005 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
CLPTM1O96005 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLPTM1O96005 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLPTM1O96005 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLPTM1O96005 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.23■□□□□ 0.51
CLPTM1O96005 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLPTM1O96005 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLPTM1O96005 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLPTM1O96005 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLPTM1O96005 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLPTM1O96005 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC18.23■□□□□ 0.51
CLPTM1O96005 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CLPTM1O96005 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
CLPTM1O96005 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLPTM1O96005 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC18.23■□□□□ 0.51
CLPTM1O96005 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC18.23■□□□□ 0.51
CLPTM1O96005 AC104187.1-201ENST00000607510 612 ntBASIC18.23■□□□□ 0.51
CLPTM1O96005 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
CLPTM1O96005 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLPTM1O96005 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.23■□□□□ 0.51
CLPTM1O96005 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.22■□□□□ 0.51
CLPTM1O96005 AC006333.2-201ENST00000607957 2099 ntBASIC18.22■□□□□ 0.51
CLPTM1O96005 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.22■□□□□ 0.51
CLPTM1O96005 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLPTM1O96005 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLPTM1O96005 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.22■□□□□ 0.51
CLPTM1O96005 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.22■□□□□ 0.51
CLPTM1O96005 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.22■□□□□ 0.51
CLPTM1O96005 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CLPTM1O96005 AC099398.1-201ENST00000567919 2776 ntBASIC18.22■□□□□ 0.51
CLPTM1O96005 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms