Protein–RNA interactions for Protein: O95503

CBX6, Chromobox protein homolog 6, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX6O95503 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CBX6O95503 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CBX6O95503 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
CBX6O95503 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
CBX6O95503 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
CBX6O95503 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CBX6O95503 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CBX6O95503 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.67
CBX6O95503 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CBX6O95503 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CBX6O95503 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.26■□□□□ 0.67
CBX6O95503 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CBX6O95503 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CBX6O95503 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.26■□□□□ 0.67
CBX6O95503 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CBX6O95503 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CBX6O95503 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CBX6O95503 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CBX6O95503 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CBX6O95503 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CBX6O95503 BET1L-204ENST00000410108 637 ntTSL 3 BASIC19.26■□□□□ 0.67
CBX6O95503 UQCRFS1P1-201ENST00000435169 820 ntBASIC19.26■□□□□ 0.67
CBX6O95503 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC19.26■□□□□ 0.67
CBX6O95503 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CBX6O95503 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC19.26■□□□□ 0.67
CBX6O95503 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
CBX6O95503 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CBX6O95503 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.26■□□□□ 0.67
CBX6O95503 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.26■□□□□ 0.67
CBX6O95503 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CBX6O95503 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CBX6O95503 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC19.26■□□□□ 0.67
CBX6O95503 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC19.26■□□□□ 0.67
CBX6O95503 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
CBX6O95503 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CBX6O95503 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CBX6O95503 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CBX6O95503 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.26■□□□□ 0.67
CBX6O95503 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
CBX6O95503 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CBX6O95503 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.26■□□□□ 0.67
CBX6O95503 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.25■□□□□ 0.67
CBX6O95503 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CBX6O95503 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CBX6O95503 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CBX6O95503 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC19.25■□□□□ 0.67
CBX6O95503 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
CBX6O95503 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.25■□□□□ 0.67
CBX6O95503 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC19.25■□□□□ 0.67
CBX6O95503 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CBX6O95503 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CBX6O95503 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CBX6O95503 RPS2P52-201ENST00000469610 820 ntBASIC19.25■□□□□ 0.67
CBX6O95503 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.25■□□□□ 0.67
CBX6O95503 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CBX6O95503 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.25■□□□□ 0.67
CBX6O95503 OR10C1-204ENST00000622521 1039 ntBASIC19.25■□□□□ 0.67
CBX6O95503 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CBX6O95503 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
CBX6O95503 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CBX6O95503 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CBX6O95503 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CBX6O95503 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.25■□□□□ 0.67
CBX6O95503 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.25■□□□□ 0.67
CBX6O95503 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC19.25■□□□□ 0.67
CBX6O95503 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.25■□□□□ 0.67
CBX6O95503 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CBX6O95503 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CBX6O95503 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CBX6O95503 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CBX6O95503 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
CBX6O95503 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CBX6O95503 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.24■□□□□ 0.67
CBX6O95503 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CBX6O95503 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CBX6O95503 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CBX6O95503 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CBX6O95503 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.24■□□□□ 0.67
CBX6O95503 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CBX6O95503 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CBX6O95503 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CBX6O95503 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CBX6O95503 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
CBX6O95503 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CBX6O95503 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CBX6O95503 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CBX6O95503 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC19.24■□□□□ 0.67
CBX6O95503 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC19.24■□□□□ 0.67
CBX6O95503 CYP2T1P-201ENST00000432607 1285 ntBASIC19.24■□□□□ 0.67
CBX6O95503 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
CBX6O95503 AP006294.2-201ENST00000641667 209 ntBASIC19.24■□□□□ 0.67
CBX6O95503 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CBX6O95503 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CBX6O95503 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CBX6O95503 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CBX6O95503 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC19.24■□□□□ 0.67
CBX6O95503 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC19.24■□□□□ 0.67
CBX6O95503 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CBX6O95503 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CBX6O95503 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms