Protein–RNA interactions for Protein: O43837

IDH3B, Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3BO43837 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
IDH3BO43837 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
IDH3BO43837 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.76■□□□□ 0.43
IDH3BO43837 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
IDH3BO43837 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
IDH3BO43837 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
IDH3BO43837 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.76■□□□□ 0.43
IDH3BO43837 PHGDH-210ENST00000641115 1638 ntBASIC17.76■□□□□ 0.43
IDH3BO43837 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.76■□□□□ 0.43
IDH3BO43837 NXN-202ENST00000537628 1340 ntTSL 3 BASIC17.76■□□□□ 0.43
IDH3BO43837 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
IDH3BO43837 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
IDH3BO43837 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC17.76■□□□□ 0.43
IDH3BO43837 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
IDH3BO43837 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
IDH3BO43837 ME3-201ENST00000323418 1068 ntTSL 5 BASIC17.76■□□□□ 0.43
IDH3BO43837 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
IDH3BO43837 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.76■□□□□ 0.43
IDH3BO43837 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
IDH3BO43837 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
IDH3BO43837 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC17.76■□□□□ 0.43
IDH3BO43837 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC17.76■□□□□ 0.43
IDH3BO43837 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
IDH3BO43837 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
IDH3BO43837 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
IDH3BO43837 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.76■□□□□ 0.43
IDH3BO43837 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
IDH3BO43837 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
IDH3BO43837 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
IDH3BO43837 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.76■□□□□ 0.43
IDH3BO43837 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.75■□□□□ 0.43
IDH3BO43837 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
IDH3BO43837 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
IDH3BO43837 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
IDH3BO43837 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
IDH3BO43837 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.75■□□□□ 0.43
IDH3BO43837 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
IDH3BO43837 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
IDH3BO43837 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC17.75■□□□□ 0.43
IDH3BO43837 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
IDH3BO43837 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
IDH3BO43837 AL355472.2-201ENST00000422958 438 ntBASIC17.75■□□□□ 0.43
IDH3BO43837 AC026271.2-201ENST00000428091 497 ntBASIC17.75■□□□□ 0.43
IDH3BO43837 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC17.75■□□□□ 0.43
IDH3BO43837 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC17.75■□□□□ 0.43
IDH3BO43837 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC17.75■□□□□ 0.43
IDH3BO43837 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC17.75■□□□□ 0.43
IDH3BO43837 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
IDH3BO43837 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
IDH3BO43837 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
IDH3BO43837 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
IDH3BO43837 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
IDH3BO43837 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
IDH3BO43837 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
IDH3BO43837 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
IDH3BO43837 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
IDH3BO43837 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
IDH3BO43837 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.74■□□□□ 0.43
IDH3BO43837 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.74■□□□□ 0.43
IDH3BO43837 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
IDH3BO43837 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC17.74■□□□□ 0.43
IDH3BO43837 Z82202.1-201ENST00000623446 1880 ntBASIC17.74■□□□□ 0.43
IDH3BO43837 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
IDH3BO43837 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
IDH3BO43837 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
IDH3BO43837 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC17.74■□□□□ 0.43
IDH3BO43837 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC17.74■□□□□ 0.43
IDH3BO43837 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.74■□□□□ 0.43
IDH3BO43837 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC17.74■□□□□ 0.43
IDH3BO43837 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
IDH3BO43837 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
IDH3BO43837 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
IDH3BO43837 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
IDH3BO43837 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
IDH3BO43837 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.74■□□□□ 0.43
IDH3BO43837 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
IDH3BO43837 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
IDH3BO43837 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
IDH3BO43837 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
IDH3BO43837 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
IDH3BO43837 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
IDH3BO43837 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
IDH3BO43837 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.73■□□□□ 0.43
IDH3BO43837 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
IDH3BO43837 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC17.73■□□□□ 0.43
IDH3BO43837 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
IDH3BO43837 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
IDH3BO43837 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
IDH3BO43837 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
IDH3BO43837 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
IDH3BO43837 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
IDH3BO43837 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
IDH3BO43837 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
IDH3BO43837 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
IDH3BO43837 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
IDH3BO43837 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
IDH3BO43837 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
IDH3BO43837 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC17.73■□□□□ 0.43
IDH3BO43837 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
IDH3BO43837 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms