Protein–RNA interactions for Protein: A0A578

TCRBV5S1A1T, T-cell receptor beta variable 5-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV5S1A1TA0A578 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TCRBV5S1A1TA0A578 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC20.27■□□□□ 0.84
TCRBV5S1A1TA0A578 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TCRBV5S1A1TA0A578 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TCRBV5S1A1TA0A578 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC20.27■□□□□ 0.84
TCRBV5S1A1TA0A578 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
TCRBV5S1A1TA0A578 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC20.27■□□□□ 0.83
TCRBV5S1A1TA0A578 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
TCRBV5S1A1TA0A578 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
TCRBV5S1A1TA0A578 AL049812.1-201ENST00000432563 2267 ntBASIC20.27■□□□□ 0.83
TCRBV5S1A1TA0A578 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC20.27■□□□□ 0.83
TCRBV5S1A1TA0A578 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TCRBV5S1A1TA0A578 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
TCRBV5S1A1TA0A578 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC20.26■□□□□ 0.83
TCRBV5S1A1TA0A578 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
TCRBV5S1A1TA0A578 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TCRBV5S1A1TA0A578 TNXA-203ENST00000507684 2038 ntBASIC20.26■□□□□ 0.83
TCRBV5S1A1TA0A578 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
TCRBV5S1A1TA0A578 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
TCRBV5S1A1TA0A578 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TCRBV5S1A1TA0A578 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC20.26■□□□□ 0.83
TCRBV5S1A1TA0A578 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC20.26■□□□□ 0.83
TCRBV5S1A1TA0A578 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
TCRBV5S1A1TA0A578 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC20.26■□□□□ 0.83
TCRBV5S1A1TA0A578 AC110285.5-201ENST00000611501 352 ntBASIC20.26■□□□□ 0.83
TCRBV5S1A1TA0A578 MMD2-204ENST00000612910 778 ntTSL 5 BASIC20.26■□□□□ 0.83
TCRBV5S1A1TA0A578 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TCRBV5S1A1TA0A578 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TCRBV5S1A1TA0A578 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TCRBV5S1A1TA0A578 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TCRBV5S1A1TA0A578 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
TCRBV5S1A1TA0A578 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
TCRBV5S1A1TA0A578 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
TCRBV5S1A1TA0A578 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.25■□□□□ 0.83
TCRBV5S1A1TA0A578 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
TCRBV5S1A1TA0A578 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC20.25■□□□□ 0.83
TCRBV5S1A1TA0A578 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC20.25■□□□□ 0.83
TCRBV5S1A1TA0A578 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
TCRBV5S1A1TA0A578 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TCRBV5S1A1TA0A578 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC20.25■□□□□ 0.83
TCRBV5S1A1TA0A578 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.25■□□□□ 0.83
TCRBV5S1A1TA0A578 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TCRBV5S1A1TA0A578 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC20.25■□□□□ 0.83
TCRBV5S1A1TA0A578 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TCRBV5S1A1TA0A578 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TCRBV5S1A1TA0A578 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
TCRBV5S1A1TA0A578 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TCRBV5S1A1TA0A578 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC20.24■□□□□ 0.83
TCRBV5S1A1TA0A578 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
TCRBV5S1A1TA0A578 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TCRBV5S1A1TA0A578 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
TCRBV5S1A1TA0A578 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TCRBV5S1A1TA0A578 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC20.24■□□□□ 0.83
TCRBV5S1A1TA0A578 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC20.24■□□□□ 0.83
TCRBV5S1A1TA0A578 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC20.24■□□□□ 0.83
TCRBV5S1A1TA0A578 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC20.24■□□□□ 0.83
TCRBV5S1A1TA0A578 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
TCRBV5S1A1TA0A578 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TCRBV5S1A1TA0A578 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
TCRBV5S1A1TA0A578 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.24■□□□□ 0.83
TCRBV5S1A1TA0A578 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
TCRBV5S1A1TA0A578 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
TCRBV5S1A1TA0A578 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
TCRBV5S1A1TA0A578 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
TCRBV5S1A1TA0A578 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
TCRBV5S1A1TA0A578 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TCRBV5S1A1TA0A578 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TCRBV5S1A1TA0A578 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TCRBV5S1A1TA0A578 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC20.23■□□□□ 0.83
TCRBV5S1A1TA0A578 FP475955.4-201ENST00000623131 1990 ntBASIC20.23■□□□□ 0.83
TCRBV5S1A1TA0A578 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
TCRBV5S1A1TA0A578 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
TCRBV5S1A1TA0A578 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
TCRBV5S1A1TA0A578 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
TCRBV5S1A1TA0A578 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TCRBV5S1A1TA0A578 TSPY20P-201ENST00000450910 630 ntBASIC20.23■□□□□ 0.83
TCRBV5S1A1TA0A578 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
TCRBV5S1A1TA0A578 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC20.23■□□□□ 0.83
TCRBV5S1A1TA0A578 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC20.23■□□□□ 0.83
TCRBV5S1A1TA0A578 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.23■□□□□ 0.83
TCRBV5S1A1TA0A578 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
TCRBV5S1A1TA0A578 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
TCRBV5S1A1TA0A578 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TCRBV5S1A1TA0A578 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
TCRBV5S1A1TA0A578 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TCRBV5S1A1TA0A578 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TCRBV5S1A1TA0A578 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
TCRBV5S1A1TA0A578 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TCRBV5S1A1TA0A578 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
TCRBV5S1A1TA0A578 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TCRBV5S1A1TA0A578 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
TCRBV5S1A1TA0A578 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
TCRBV5S1A1TA0A578 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
TCRBV5S1A1TA0A578 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TCRBV5S1A1TA0A578 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
TCRBV5S1A1TA0A578 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TCRBV5S1A1TA0A578 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC20.22■□□□□ 0.83
TCRBV5S1A1TA0A578 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TCRBV5S1A1TA0A578 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TCRBV5S1A1TA0A578 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms