Protein–RNA interactions for Protein: A0A1B0GX49

TRBV6-4, T-cell receptor beta variable 6-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-4A0A1B0GX49 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRBV6-4A0A1B0GX49 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRBV6-4A0A1B0GX49 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TRBV6-4A0A1B0GX49 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRBV6-4A0A1B0GX49 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRBV6-4A0A1B0GX49 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRBV6-4A0A1B0GX49 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRBV6-4A0A1B0GX49 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC13.68□□□□□ -0.22
TRBV6-4A0A1B0GX49 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC13.68□□□□□ -0.22
TRBV6-4A0A1B0GX49 AC120498.9-201ENST00000339021 3867 ntBASIC13.68□□□□□ -0.22
TRBV6-4A0A1B0GX49 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TRBV6-4A0A1B0GX49 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
TRBV6-4A0A1B0GX49 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRBV6-4A0A1B0GX49 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRBV6-4A0A1B0GX49 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRBV6-4A0A1B0GX49 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
TRBV6-4A0A1B0GX49 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
TRBV6-4A0A1B0GX49 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRBV6-4A0A1B0GX49 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRBV6-4A0A1B0GX49 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRBV6-4A0A1B0GX49 ID1-201ENST00000376105 1233 ntBASIC13.68□□□□□ -0.22
TRBV6-4A0A1B0GX49 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRBV6-4A0A1B0GX49 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
TRBV6-4A0A1B0GX49 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TRBV6-4A0A1B0GX49 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC13.68□□□□□ -0.22
TRBV6-4A0A1B0GX49 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
TRBV6-4A0A1B0GX49 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
TRBV6-4A0A1B0GX49 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRBV6-4A0A1B0GX49 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
TRBV6-4A0A1B0GX49 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC13.68□□□□□ -0.22
TRBV6-4A0A1B0GX49 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
TRBV6-4A0A1B0GX49 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRBV6-4A0A1B0GX49 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRBV6-4A0A1B0GX49 LINC01465-201ENST00000408887 1940 ntBASIC13.68□□□□□ -0.22
TRBV6-4A0A1B0GX49 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRBV6-4A0A1B0GX49 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC13.68□□□□□ -0.22
TRBV6-4A0A1B0GX49 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRBV6-4A0A1B0GX49 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRBV6-4A0A1B0GX49 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
TRBV6-4A0A1B0GX49 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRBV6-4A0A1B0GX49 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRBV6-4A0A1B0GX49 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC13.67□□□□□ -0.22
TRBV6-4A0A1B0GX49 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC13.67□□□□□ -0.22
TRBV6-4A0A1B0GX49 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRBV6-4A0A1B0GX49 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC13.67□□□□□ -0.22
TRBV6-4A0A1B0GX49 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRBV6-4A0A1B0GX49 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC13.67□□□□□ -0.22
TRBV6-4A0A1B0GX49 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRBV6-4A0A1B0GX49 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC13.67□□□□□ -0.22
TRBV6-4A0A1B0GX49 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRBV6-4A0A1B0GX49 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRBV6-4A0A1B0GX49 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRBV6-4A0A1B0GX49 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRBV6-4A0A1B0GX49 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRBV6-4A0A1B0GX49 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRBV6-4A0A1B0GX49 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRBV6-4A0A1B0GX49 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRBV6-4A0A1B0GX49 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRBV6-4A0A1B0GX49 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRBV6-4A0A1B0GX49 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC13.67□□□□□ -0.22
TRBV6-4A0A1B0GX49 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRBV6-4A0A1B0GX49 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
TRBV6-4A0A1B0GX49 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC13.67□□□□□ -0.22
TRBV6-4A0A1B0GX49 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRBV6-4A0A1B0GX49 KLF2-202ENST00000592003 564 ntTSL 3 BASIC13.67□□□□□ -0.22
TRBV6-4A0A1B0GX49 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRBV6-4A0A1B0GX49 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRBV6-4A0A1B0GX49 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
TRBV6-4A0A1B0GX49 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRBV6-4A0A1B0GX49 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRBV6-4A0A1B0GX49 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
TRBV6-4A0A1B0GX49 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
TRBV6-4A0A1B0GX49 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRBV6-4A0A1B0GX49 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRBV6-4A0A1B0GX49 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRBV6-4A0A1B0GX49 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC13.66□□□□□ -0.22
TRBV6-4A0A1B0GX49 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRBV6-4A0A1B0GX49 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
TRBV6-4A0A1B0GX49 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC13.66□□□□□ -0.22
TRBV6-4A0A1B0GX49 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
TRBV6-4A0A1B0GX49 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRBV6-4A0A1B0GX49 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC13.66□□□□□ -0.22
TRBV6-4A0A1B0GX49 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
TRBV6-4A0A1B0GX49 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRBV6-4A0A1B0GX49 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRBV6-4A0A1B0GX49 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC13.66□□□□□ -0.22
TRBV6-4A0A1B0GX49 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRBV6-4A0A1B0GX49 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRBV6-4A0A1B0GX49 GAS7-202ENST00000396115 929 ntTSL 5 BASIC13.66□□□□□ -0.22
TRBV6-4A0A1B0GX49 KRT17P3-201ENST00000420566 1262 ntBASIC13.66□□□□□ -0.22
TRBV6-4A0A1B0GX49 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC13.66□□□□□ -0.22
TRBV6-4A0A1B0GX49 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC13.66□□□□□ -0.22
TRBV6-4A0A1B0GX49 RHOD-202ENST00000532559 538 ntTSL 3 BASIC13.66□□□□□ -0.22
TRBV6-4A0A1B0GX49 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC13.66□□□□□ -0.22
TRBV6-4A0A1B0GX49 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRBV6-4A0A1B0GX49 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRBV6-4A0A1B0GX49 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC13.66□□□□□ -0.22
TRBV6-4A0A1B0GX49 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRBV6-4A0A1B0GX49 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC13.66□□□□□ -0.22
TRBV6-4A0A1B0GX49 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms